RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 OR52B6Q8NGF0 335 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 TRPC4APQ8TEL6 797 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 ZNF285Q96NJ3 590 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 PITHD1Q9GZP4 211 aaPredicted RBP23.4■■□□□ 1.34
HOXC9-201ENST00000303450 ASCL3Q9NQ33 180 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 STARD5Q9NSY2 213 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 NKIRAS1Q9NYS0 192 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 FOXJ2Q9P0K8 574 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 WDFY3Q8IZQ1 3526 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 CDRT15L2A8MXV6 281 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 DYNC1I1O14576 645 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 ZSCAN9O15535 394 aaPredicted RBP23.39■■□□□ 1.34
HOXC9-201ENST00000303450 UGDHO60701 494 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 SCRG1O75711 98 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 TIAF1O95411 115 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 CLDN9O95484 217 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 OTCP00480 354 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 CD22P20273 847 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 SCTRP47872 440 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 SERPINB4P48594 390 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 E2F2Q14209 437 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 LIPJQ5W064 366 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 TLDC1Q6P9B6 456 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 ZNF655Q8N720 491 aaPredicted RBP23.39■■□□□ 1.34
HOXC9-201ENST00000303450 CSNK1A1LQ8N752 337 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 NTMT1Q9BV86 223 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 ULBP3Q9BZM4 244 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 SLC7A5P2Q9GIP4 190 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 SYNPO2LQ9H987 977 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 AP1M2Q9Y6Q5 423 aa23.39■■□□□ 1.34
HOXC9-201ENST00000303450 CEP295Q9C0D2 2601 aa23.39■■□□□ 1.33
HOXC9-201ENST00000303450 ATP8B1O43520 1251 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 MLYCDO95822 493 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 BPGMP07738 259 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 HPDP32754 393 aaPredicted RBP23.38■■□□□ 1.33
HOXC9-201ENST00000303450 HNF4AP41235 474 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 SLC18A1P54219 525 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 GRHL2Q6ISB3 625 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 NUDCD3Q8IVD9 361 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 UBE2E3Q969T4 207 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 CDK15Q96Q40 435 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 PAIP2Q9BPZ3 127 aaKnown RBP23.38■■□□□ 1.33
HOXC9-201ENST00000303450 NLNQ9BYT8 704 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 DRC3Q9H069 523 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 GSTO2Q9H4Y5 243 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 NT5DC2Q9H857 520 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 MLXIPLQ9NP71 852 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 ZFP69BQ9UJL9 534 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 H3BMH7 237 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 TXNDC9O14530 226 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 AHRP35869 848 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 ERVPABLB-1P60509 514 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 LCP2Q13094 533 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 TRAF3Q13114 568 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 GRM7Q14831 915 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 PRAMEF17Q5VTA0 474 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 HHATQ5VTY9 493 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 VN1R4Q7Z5H5 301 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 MILR1Q7Z6M3 343 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 ASPGQ86U10 573 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 L3MBTL4Q8NA19 623 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 TTC29Q8NA56 475 aaPredicted RBP23.38■■□□□ 1.33
HOXC9-201ENST00000303450 CAMKVQ8NCB2 501 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 TTLQ8NG68 377 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 SLC13A3Q8WWT9 602 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 RNF31Q96EP0 1072 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 ZNF578Q96N58 590 aaPredicted RBP23.38■■□□□ 1.33
HOXC9-201ENST00000303450 GATA5Q9BWX5 397 aaPredicted RBP23.38■■□□□ 1.33
HOXC9-201ENST00000303450 PRM3Q9NNZ6 103 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 STK38LQ9Y2H1 464 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 RNF11Q9Y3C5 154 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 PCDHB3Q9Y5E6 796 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 AKAP13Q12802 2813 aa23.38■■□□□ 1.33
HOXC9-201ENST00000303450 WDR91A4D1P6 747 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 PPP6CO00743 305 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 BIRC5O15392 142 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 ZNF749O43361 778 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 KIAA0754O94854 1291 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 STATHP02808 62 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 SERPIND1P05546 499 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 DHRS4L1P0CG22 281 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 MED27Q6P2C8 311 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 FRMD7Q6ZUT3 714 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 ANKRD53Q8N9V6 530 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 MGARPQ8TDB4 240 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 NDC1Q9BTX1 674 aa23.37■■□□□ 1.33
HOXC9-201ENST00000303450 ACTR5Q9H9F9 607 aaPredicted RBP23.37■■□□□ 1.33
HOXC9-201ENST00000303450 ZNF490Q9ULM2 529 aaPredicted RBP23.37■■□□□ 1.33
HOXC9-201ENST00000303450 FITM1A5D6W6 292 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 NDUFS4O43181 175 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 STK17BO94768 372 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 NTRK1P04629 796 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 SLC35G6P0C7Q6 338 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 ZNF28P17035 718 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 CYP4F2P78329 520 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 CPSF6Q16630 551 aaKnown RBP eCLIP23.36■■□□□ 1.332e-7■■■■■ 27.5
HOXC9-201ENST00000303450 HKDC1Q2TB90 917 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 TBC1D25Q3MII6 688 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.36■■□□□ 1.33
HOXC9-201ENST00000303450 TRPV3Q8NET8 790 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms