RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 NIPAL4Q0D2K0 466 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 ZDHHC17Q8IUH5 632 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 CSGALNACT1Q8TDX6 532 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC27A6Q9Y2P4 619 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 FUT4P22083 530 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 AHCYP23526 432 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 HIST2H3PS2Q5TEC6 136 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 KANK2Q63ZY3 851 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 FAIMQ9NVQ4 179 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 PTPRZ1P23471 2315 aaPredicted RBP10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC12A8A0AV02 714 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 GRXCR2A6NFK2 248 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 SEC14L6B5MCN3 397 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 EI24O14681 340 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC22A2O15244 555 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 PRKCIP41743 596 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 ATP6V0D1P61421 351 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 PAN2Q504Q3 1202 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 CERS2Q96G23 380 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 DUSP9Q99956 384 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 MIR1-1HGQ9H1L0 117 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 BRF2Q9HAW0 419 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 NPEPPSL1A6NEC2 478 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 LEPRP48357 1165 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 TGFBIQ15582 683 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 IQCKQ8N0W5 287 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 MAPKAP1Q9BPZ7 522 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 C17orf102A2RUQ5 167 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 EDF1O60869 148 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 RPP30P78346 268 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 MFSD14AQ96MC6 490 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 TAPBPLQ9BX59 468 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 COPS7AQ9UBW8 275 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 MRPS33Q9Y291 106 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 TPST2O60704 377 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 HRGP04196 525 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 DNM1P34Q6PK57 102 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 IQCHQ86VS3 1027 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 TGM7Q96PF1 710 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 IGSF9Q9P2J2 1179 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 POLLQ9UGP5 575 aa10.89□□□□□ -0.67
HDGFL3-201ENST00000299633 FAM155BO75949 473 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 NPTX1Q15818 432 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 IL23RQ5VWK5 629 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 C19orf35Q6ZS72 473 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 EDEM1Q92611 657 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 DAZAP1Q96EP5 407 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 FOLH1BQ9HBA9 442 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 HEXBP07686 556 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 HOXB9P17482 250 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 LSSP48449 732 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 NRG1Q02297 640 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 TSTQ16762 297 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 C9orf64Q5T6V5 341 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 PAPSS1O43252 624 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 AMD1P17707 334 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 DUPD1Q68J44 220 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 NPNTQ6UXI9 565 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 KAZALD1Q96I82 304 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF436Q9C0F3 470 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 ERAL1O75616 437 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 FNDC3BQ53EP0 1204 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 PRELID2Q8N945 189 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 HS6ST2Q96MM7 605 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 POLR2J3Q9H1A7 115 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 SGK2Q9HBY8 427 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 TMEM9Q9P0T7 183 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 NCDNQ9UBB6 729 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 ELOA3DA6NLF2 546 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 PROS1P07225 676 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 HOXD12P35452 270 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 MLLT1Q03111 559 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 ELOA3BQ3SY89 546 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 RAB41Q5JT25 222 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 MLIPQ5VWP3 458 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 XKR5Q6UX68 686 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 LIX1Q8N485 282 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 ELOA3Q8NG57 546 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 SMIM12Q96EX1 92 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 FAXDC2Q96IV6 333 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 TSPAN16Q9UKR8 245 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 CPED1A4D0V7 1026 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 BRINP1O60477 761 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 RPL7P18124 248 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 KHKP50053 298 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 VSX2P58304 361 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 GINS1Q14691 196 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 ITIH5Q86UX2 942 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 ZDHHC21Q8IVQ6 265 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 ADAMTS15Q8TE58 950 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 CD300AQ9UGN4 299 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 ACSL6Q9UKU0 697 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 TANC2Q9HCD6 1990 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 DIRAS1O95057 198 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 CSF2P04141 144 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 CDNFQ49AH0 187 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 TMEM214Q6NUQ4 689 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 TEX10Q9NXF1 929 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 TBX10O75333 385 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 TXNDC12O95881 172 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms