RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 TTYH3Q9C0H2 523 aa14.46□□□□□ -0.09
SCN3B-201ENST00000299333 ZBTB26Q9HCK0 441 aa14.46□□□□□ -0.09
SCN3B-201ENST00000299333 EBF1Q9UH73 591 aa14.46□□□□□ -0.09
SCN3B-201ENST00000299333 TBC1D3DA0A087WVF3 549 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 TBC1D3IA0A087WXS9 549 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 TBC1D3EA0A087X179 549 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 TBC1D3KA0A087X1G2 549 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 TBC1D3FA6NER0 549 aaPredicted RBP14.46□□□□□ -0.1
SCN3B-201ENST00000299333 A8MT66 165 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 TBC1D3LB9A6J9 549 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 TBC1D3HP0C7X1 549 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 PRPS1L1P21108 318 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 CAPZA1P52907 286 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 CREMQ03060 361 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 PTGR1Q14914 329 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 LRRC66Q68CR7 880 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 TBC1D3GQ6DHY5 549 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 TBC1D3CQ6IPX1 549 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 EPGNQ6UW88 154 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 TBC1D3Q8IZP1 549 aaPredicted RBP14.46□□□□□ -0.1
SCN3B-201ENST00000299333 SOX17Q9H6I2 414 aaPredicted RBP14.46□□□□□ -0.1
SCN3B-201ENST00000299333 CNTN3Q9P232 1028 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 MGAT4CQ9UBM8 478 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 FAM170BA6NMN3 283 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 IFNA10P01566 189 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 IFNA4P05014 189 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 SLC35G6P0C7Q6 338 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 GGT5P36269 586 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 PTGER3P43115 390 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 SLC6A9P48067 706 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 NOMO2Q5JPE7 1267 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 CES5AQ6NT32 575 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 HFE2Q6ZVN8 426 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 Q8N402 240 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 NFKBIDQ8NI38 313 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 SHKBP1Q8TBC3 707 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 GJD4Q96KN9 370 aaPredicted RBP14.46□□□□□ -0.1
SCN3B-201ENST00000299333 EIF2B3Q9NR50 452 aaKnown RBP14.46□□□□□ -0.1
SCN3B-201ENST00000299333 ZCCHC3Q9NUD5 404 aaKnown RBP14.46□□□□□ -0.1
SCN3B-201ENST00000299333 ERVK13-1Q9NX77 482 aa14.46□□□□□ -0.1
SCN3B-201ENST00000299333 CBY3A6NI87 242 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 E2F3O00716 465 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 SLC7A4O43246 635 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 CREG1O75629 220 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 PCCBP05166 539 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 IDSP22304 550 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 CHMP24386 653 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 TAF10Q12962 218 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 HSDL2Q6YN16 418 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 ACBD4Q8NC06 268 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 JSRP1Q96MG2 331 aaPredicted RBP14.45□□□□□ -0.1
SCN3B-201ENST00000299333 FAM83DQ9H4H8 585 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 GFOD1Q9NXC2 390 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 GLS2Q9UI32 602 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 A0A0G2JN53 185 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 GRM6O15303 877 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 PCSK2P16519 638 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 NDUFA9Q16795 377 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 UBQLNLQ8IYU4 475 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF565Q8N9K5 539 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 RPLP0P6Q8NHW5 317 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 OR2M4Q96R27 311 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 TCEAL7Q9BRU2 100 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 CENPOQ9BU64 300 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 TRMT61BQ9BVS5 477 aaKnown RBP14.45□□□□□ -0.1
SCN3B-201ENST00000299333 TTTY10Q9BZA0 68 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 INSIG1O15503 277 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 TLX3O43711 291 aaPredicted RBP14.45□□□□□ -0.1
SCN3B-201ENST00000299333 SFTPBP07988 381 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 CHRNB2P17787 502 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 MRPS6P82932 125 aaKnown RBP14.45□□□□□ -0.1
SCN3B-201ENST00000299333 FOXM1Q08050 763 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 LHFPL3Q86UP9 236 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 ZIM2Q9NZV7 527 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 COL20A1Q9P218 1284 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 A0A1B0GVT2 93 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 GLUD1P00367 558 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 TRIM23P36406 574 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 CASP7P55210 303 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 DPPA2Q7Z7J5 298 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 RBM23Q86U06 439 aaKnown RBP14.45□□□□□ -0.1
SCN3B-201ENST00000299333 CPNE8Q86YQ8 564 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 C4orf32Q8N8J7 132 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 NAT8LQ8N9F0 302 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 NAXEQ8NCW5 288 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 POC1BQ8TC44 478 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 ALPK1Q96QP1 1244 aa14.45□□□□□ -0.1
SCN3B-201ENST00000299333 OR51F1A6NGY5 319 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 CSTBP04080 98 aaKnown RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 HSD11B1P28845 292 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 CORO1AP31146 461 aaKnown RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 GPR68Q15743 365 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 THEM6Q8WUY1 208 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 WRAP53Q9BUR4 548 aaKnown RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 ADAP2Q9NPF8 381 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 VNN3Q9NY84 501 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 MRPS23Q9Y3D9 190 aaKnown RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 VWDEQ8N2E2 1590 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 TACR2P21452 398 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 ARSFP54793 590 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms