RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 PIK3R3Q92569 461 aa6.72□□□□□ -1.33
GAPVD1-202ENST00000297933 CPNE2Q96FN4 548 aaPredicted RBP6.72□□□□□ -1.33
GAPVD1-202ENST00000297933 SLC39A3Q9BRY0 314 aa6.72□□□□□ -1.33
GAPVD1-202ENST00000297933 AP4B1Q9Y6B7 739 aa6.72□□□□□ -1.33
GAPVD1-202ENST00000297933 ZNF142P52746 1687 aaPredicted RBP6.72□□□□□ -1.33
GAPVD1-202ENST00000297933 A0A1W2PPL8 197 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 LOC730098B7Z3J9 87 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 LCA5LO95447 670 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 NCK1P16333 377 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 NTHL1P78549 312 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 HHEXQ03014 270 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 RING1Q06587 406 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 DSC1Q08554 894 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 GALNT2Q10471 571 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 PRPF38BQ5VTL8 546 aaKnown RBP6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 FAM69BQ5VUD6 431 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 DENND5AQ6IQ26 1287 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 TMEM151BQ8IW70 566 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 PGAM4Q8N0Y7 254 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 MEIOBQ8N635 442 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 LRRC17Q8N6Y2 441 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 HORMAD2Q8N7B1 307 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 OR5L2Q8NGL0 311 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 SORCS1Q8WY21 1168 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 GATA5Q9BWX5 397 aaPredicted RBP6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 SLC17A9Q9BYT1 436 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 OR51B5Q9H339 312 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 SIX2Q9NPC8 291 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 FLRT1Q9NZU1 646 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 GRHPRQ9UBQ7 328 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 SLC2A6Q9UGQ3 507 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 WASF3Q9UPY6 502 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 TMED5Q9Y3A6 229 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 A0A0X1KG70 313 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 ZNF860A6NHJ4 632 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 H7BY64 318 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 RNF13O43567 381 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 EN2P19622 333 aaPredicted RBP6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 MTPNP58546 118 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 POU6F2P78424 691 aaPredicted RBP6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 PLCXD2Q0VAA5 305 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 INCA1Q0VD86 236 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 ABCA11PQ4W5N1 156 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 KLHL22Q53GT1 634 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 SLC39A4Q6P5W5 647 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 CCDC80Q76M96 950 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 ZZZ3Q8IYH5 903 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 CLDN19Q8N6F1 224 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 PRAP1Q96NZ9 151 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 DCBLD2Q96PD2 775 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 TBX5Q99593 518 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 MAP3K3Q99759 626 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 BRF2Q9HAW0 419 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 MGAT4AQ9UM21 535 aa6.71□□□□□ -1.33
GAPVD1-202ENST00000297933 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 TMEM265A0A087WTH1 108 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 MATN2O00339 956 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 MANBAO00462 879 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 GPR37L1O60883 481 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 TNFRSF21O75509 655 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 KRT36O76013 467 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 STC2O76061 302 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 CPNE6O95741 557 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 THRBP10828 461 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 PGAM2P15259 253 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 ENGP17813 658 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 PBX1P40424 430 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 ZNF84P51523 738 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 HADHBP55084 474 aaKnown RBP6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 SYT16Q17RD7 645 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 PTCHD3Q3KNS1 767 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 RAET1LQ5VY80 246 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 METTL21CQ5VZV1 264 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 PIM3Q86V86 326 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 ZNF676Q8N7Q3 588 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 LENG8Q96PV6 779 aaPredicted RBP6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 NPY6RQ99463 290 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 GAL3ST1Q99999 423 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 G6PC3Q9BUM1 346 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 NPLQ9BXD5 320 aaPredicted RBP6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 CLK4Q9HAZ1 481 aaKnown RBP6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 MAGEE1Q9HCI5 957 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 GDE1Q9NZC3 331 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 SOX1O00570 391 aaPredicted RBP6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 SCO2O43819 266 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 HMGN1P05114 100 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 C6P13671 934 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 HNRNPA2B1P22626 353 aaKnown RBP6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 PDHA2P29803 388 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 PRDX6P30041 224 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 FOLR3P41439 243 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 LRP8Q14114 963 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 SF3B4Q15427 424 aaKnown RBP eCLIP6.71□□□□□ -1.345e-12■■■■■ 40
GAPVD1-202ENST00000297933 HSDL2Q6YN16 418 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 CSNK1A1LQ8N752 337 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 OR1F2PQ96R84 312 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 PELOQ9BRX2 385 aaKnown RBP6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 ABCB10Q9NRK6 738 aa6.71□□□□□ -1.34
GAPVD1-202ENST00000297933 REXO2Q9Y3B8 237 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms