RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 DZANK1Q9NVP4 752 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 MGAT4BQ9UQ53 548 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 LAMB4A4D0S4 1761 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 CAPN14A8MX76 684 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 PDLIM1O00151 329 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 SNX4O95219 450 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 ALDOAP04075 364 aaKnown RBP12.41□□□□□ -0.42
PTCD1-201ENST00000292478 PIM1P11309 404 aaPredicted RBP12.41□□□□□ -0.42
PTCD1-201ENST00000292478 SUOXP51687 545 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 PGDP52209 483 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 BTN3A2P78410 334 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 CLDN19Q8N6F1 224 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 CLCC1Q96S66 551 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 REEP4Q9H6H4 257 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 MAP10Q9P2G4 905 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 PFDN2Q9UHV9 154 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 RIMKLBQ9ULI2 386 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 CLEC4AQ9UMR7 237 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 A0A0X1KG70 313 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 FAM72CH0Y354 149 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 HPRP00739 348 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 ZNF805Q5CZA5 627 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 FAM72AQ5TYM5 149 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 FAM72DQ6L9T8 149 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 OGFOD2Q6N063 350 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 FAM72BQ86X60 149 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 A0A0D9SEW6 157 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 CPSF4LA6NMK7 179 aaKnown RBP12.4□□□□□ -0.42
PTCD1-201ENST00000292478 SDHDO14521 159 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 S1PR4O95977 384 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 UQCRC2P22695 453 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 HTR1EP28566 365 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 TMEM115Q12893 351 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ATP6AP1Q15904 470 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
PTCD1-201ENST00000292478 KIAA1614Q5VZ46 1190 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 DNM1P34Q6PK57 102 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ZNF773Q6PK81 442 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ZFAND4Q86XD8 727 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 PGAP3Q96FM1 320 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-201ENST00000292478 SLC45A3Q96JT2 553 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 SLC22A4Q9H015 551 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 BTBD1Q9H0C5 482 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 FBXL12Q9NXK8 326 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 TNFRSF10DQ9UBN6 386 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 SEC14L4Q9UDX3 406 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 CYTH4Q9UIA0 394 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 TMEM5Q9Y2B1 443 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 WNT6Q9Y6F9 365 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 AOC2O75106 756 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ENTPD6O75354 484 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 DNAJB5O75953 348 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 HNRNPA1P09651 372 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTCD1-201ENST00000292478 PEPDP12955 493 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 NR2C1P13056 603 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ACRV1P26436 265 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 MLLT3P42568 568 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-201ENST00000292478 GDF5P43026 501 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 RBBP4Q09028 425 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 SIX1Q15475 284 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-201ENST00000292478 COQ5Q5HYK3 327 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 C7orf57Q8NEG2 295 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 OR9I1Q8NGQ6 314 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 FAM110BQ8TC76 370 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 TP53INP1Q96A56 240 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 Q9N2J8 555 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ADAMTS5Q9UNA0 930 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 HCN4Q9Y3Q4 1203 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 CLCA3PQ9Y6N3 262 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 H0YJX3 145 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 GRID2O43424 1007 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ENPP2Q13822 863 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 IDNKQ5T6J7 187 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 REEP3Q6NUK4 255 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 SLC9B2Q86UD5 537 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 CHST4Q8NCG5 386 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 OR5AK3PQ8NH89 298 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ACTL8Q9H568 366 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 CAPN5O15484 640 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ABCB7O75027 752 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 CXCR1P25024 350 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 GNALP38405 381 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 KCNC4Q03721 635 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 SOX4Q06945 474 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-201ENST00000292478 RASGEF1BQ0VAM2 473 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 FAM189A2Q15884 450 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ANO7Q6IWH7 933 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 FATE1Q969F0 183 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 ALPK1Q96QP1 1244 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 TBL1XR1Q9BZK7 514 aa12.4□□□□□ -0.42
PTCD1-201ENST00000292478 GJA1P17302 382 aa12.4□□□□□ -0.43
PTCD1-201ENST00000292478 CYBRD1Q53TN4 286 aa12.4□□□□□ -0.43
PTCD1-201ENST00000292478 C2orf27AQ580R0 203 aa12.4□□□□□ -0.43
PTCD1-201ENST00000292478 NRSN1Q8IZ57 195 aa12.4□□□□□ -0.43
PTCD1-201ENST00000292478 PCDHB3Q9Y5E6 796 aa12.4□□□□□ -0.43
PTCD1-201ENST00000292478 FAM170BA6NMN3 283 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF879B4DU55 563 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 F7P08709 466 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms