RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 RIPK2O43353 540 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 ALBP02768 609 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 KLK3P07288 261 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 UMODP07911 640 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 SBK3P0C264 359 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 EZRP15311 586 aaKnown RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 STMN1P16949 149 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 CCND1P24385 295 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 CRABP2P29373 138 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 RPA3P35244 121 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 GDF5P43026 501 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 ARSFP54793 590 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 FOXL2P58012 376 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 VSX2P58304 361 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 ATP6V0D1P61421 351 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 RPS18P62269 152 aaKnown RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 CDC20Q12834 499 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 COL9A2Q14055 689 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 GRM7Q14831 915 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 NCF4Q15080 339 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 UGT8Q16880 541 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 HKDC1Q2TB90 917 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 NKAIN1Q4KMZ8 207 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 CATSPEREQ5SY80 951 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 PRAMEF13Q5VWM6 474 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 TIFABQ6ZNK6 161 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 SLCO4C1Q6ZQN7 724 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 SYVN1Q86TM6 617 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 PLD3Q8IV08 490 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 APLFQ8IW19 511 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 CTAGE3PQ8IX95 158 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 IFT20Q8IY31 132 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 AFAP1L2Q8N4X5 818 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 ANKRD53Q8N9V6 530 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 PDPRQ8NCN5 879 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 ZNF740Q8NDX6 193 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 RHEBL1Q8TAI7 183 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 EXTL1Q92935 676 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 MR1Q95460 341 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 NEIL2Q969S2 332 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 NXNL1Q96CM4 212 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 WDR34Q96EX3 536 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 TSPAN17Q96FV3 270 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 SELENOSQ9BQE4 189 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 ACTL8Q9H568 366 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 FANCEQ9HB96 536 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 CCDC177Q9NQR7 707 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 CUTCQ9NTM9 273 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 GMPR2Q9P2T1 348 aaKnown RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 MTRF1LQ9UGC7 380 aaKnown RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 FETUBQ9UGM5 382 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 DCTN4Q9UJW0 460 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 RUVBL1Q9Y265 456 aaKnown RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 SLC22A14Q9Y267 594 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 MRPS2Q9Y399 296 aaKnown RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 SCN3AQ9NY46 2000 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 A0A1W2PQ72 361 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 NPEPPSL1A6NEC2 478 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 MAP2K7O14733 419 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 RFPL1O75677 317 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 CEACAM4O75871 244 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 WFS1O76024 890 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 ACSL3O95573 720 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 GUCA1CO95843 209 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 SYF2O95926 243 aaKnown RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 HIST1H2AGP0C0S8 130 aaPredicted RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 RHOXF2BP0C7M4 288 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 HIST1H2ADP20671 130 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 SAT1P21673 171 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 BCL6P41182 706 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 CASP2P42575 452 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 HNMTP50135 292 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 DCDP81605 110 aaKnown RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 IRF9Q00978 393 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 FAM53BQ14153 422 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 SLMAPQ14BN4 828 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 NAA25Q14CX7 972 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 UAP1Q16222 522 aaPredicted RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 FAM214AQ32MH5 1076 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 MROH9Q5TGP6 573 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 GARNL3Q5VVW2 1013 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 CAPN13Q6MZZ7 669 aaPredicted RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 TMEM214Q6NUQ4 689 aaKnown RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 CEP128Q6ZU80 1094 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 MED25Q71SY5 747 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 TRMT10CQ7L0Y3 403 aaKnown RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 CCDC91Q7Z6B0 441 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 ADAMTSL2Q86TH1 951 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 THOC6Q86W42 341 aaKnown RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 GPR135Q8IZ08 494 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 ENDOVQ8N8Q3 282 aaKnown RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 AMER3Q8N944 861 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 MFSD9Q8NBP5 474 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 CREB3L4Q8TEY5 395 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 ATL1Q8WXF7 558 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 CLIP3Q96DZ5 547 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 HIST1H2AHQ96KK5 128 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 CATSPER2Q96P56 530 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms