RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PPM1MQ96MI6 270 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 RHBGQ9H310 441 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 ARL8BQ9NVJ2 186 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 TRBC2A0A5B9 178 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 OR2A25A4D2G3 310 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 FOXE1O00358 373 aaPredicted RBP18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 CAPN5O15484 640 aaPredicted RBP18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 FLRT2O43155 660 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 RGS14O43566 566 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 OR1F1O43749 312 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 DUX1O43812 170 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 NRP2O60462 931 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 SLC34A2O95436 690 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 CBX6O95503 412 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 HSD3B1P14060 373 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 HSD3B2P26439 372 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 PIK3CBP42338 1070 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 DUSP3P51452 185 aaPredicted RBP18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 CSTF3Q12996 717 aaKnown RBP18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 DDX39BQ13838 428 aaKnown RBP18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 FCRL6Q6DN72 434 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 ANKRD53Q8N9V6 530 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 ZDHHC12Q96GR4 267 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 EDEM2Q9BV94 578 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 ACPTQ9BZG2 426 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 SEMA6CQ9H3T2 930 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 BRF2Q9HAW0 419 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 RXFP3Q9NSD7 469 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 ADGRE2Q9UHX3 823 aa18.13■□□□□ 0.49
PDLIM3-202ENST00000284770 MAGEB17A8MXT2 336 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 HAT1O14929 419 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 LCMT2O60294 686 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 UNC5CO95185 931 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 PRR35P0CG20 571 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 CD1CP29017 333 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 SCTRP47872 440 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 AMZ1Q400G9 498 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 PERM1Q5SV97 790 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 PLD3Q8IV08 490 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 RNF175Q8N4F7 328 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 TBC1D19Q8N5T2 526 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 CPSF7Q8N684 471 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 TMEM9BQ9NQ34 198 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 C1GALT1Q9NS00 363 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 GOLGA4Q13439 2230 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 RALGAPA1Q6GYQ0 2036 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 ANKDD1BA6NHY2 528 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 ANKRD65E5RJM6 399 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 LSM1O15116 133 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 PVRP15151 417 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 EZRP15311 586 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 CDH3P22223 829 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 SERPINB1P30740 379 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 PHEXP78562 749 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 DAB2P98082 770 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 HMGCS1Q01581 520 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 RELAQ04206 551 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 IMPG1Q17R60 797 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 VN1R5Q7Z5H4 357 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 PLXDC1Q8IUK5 500 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 TTLQ8NG68 377 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 BAHD1Q8TBE0 780 aaPredicted RBP18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 CATSPER2Q96P56 530 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 TGM7Q96PF1 710 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 CD180Q99467 661 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 DMRT3Q9NQL9 472 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 GIMAP2Q9UG22 337 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 PPT2Q9UMR5 302 aa18.12■□□□□ 0.49
PDLIM3-202ENST00000284770 PEX11AO75192 247 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 GSTM2P28161 218 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 BCL6P41182 706 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 GFERP55789 205 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 NCALDP61601 193 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 RPS15AP62244 130 aaKnown RBP18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 CFHR1Q03591 330 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 SQSTM1Q13501 440 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 NR6A1Q15406 480 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 ATP6AP1LQ52LC2 224 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 FBXO42Q6P3S6 717 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 WDR74Q6RFH5 385 aaPredicted RBP18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 FAM92BQ6ZTR7 304 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 RHBDD1Q8TEB9 315 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 MARK4Q96L34 752 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 PPP3R2Q96LZ3 170 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 TRAPPC9Q96Q05 1148 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 MAP3K3Q99759 626 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 CCDC3Q9BQI4 270 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 KLHL25Q9H0H3 589 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 PARD6AQ9NPB6 346 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 COPG1Q9Y678 874 aaKnown RBP18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 HEATR5BQ9P2D3 2071 aa18.11■□□□□ 0.49
PDLIM3-202ENST00000284770 TLCD2A6NGC4 264 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 NPIPB8E9PQR5 432 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 UBDO15205 165 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 RSL1D1O76021 490 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 ALDOCP09972 364 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 CD59P13987 128 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 HOXB3P14651 431 aaPredicted RBP18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 ST6GAL1P15907 406 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms