RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 Q6ZVL8 140 aa24.19■■□□□ 1.46
ROM1-201ENST00000278833 CEP68Q76N32 757 aa24.19■■□□□ 1.46
ROM1-201ENST00000278833 SLC22A15Q8IZD6 547 aa24.19■■□□□ 1.46
ROM1-201ENST00000278833 SMYD1Q8NB12 490 aa24.19■■□□□ 1.46
ROM1-201ENST00000278833 BPIFB6Q8NFQ5 453 aa24.19■■□□□ 1.46
ROM1-201ENST00000278833 CHTF18Q8WVB6 975 aa24.19■■□□□ 1.46
ROM1-201ENST00000278833 HSPBAP1Q96EW2 488 aa24.19■■□□□ 1.46
ROM1-201ENST00000278833 FUNDC2Q9BWH2 189 aa24.19■■□□□ 1.46
ROM1-201ENST00000278833 RAD21L1Q9H4I0 556 aa24.19■■□□□ 1.46
ROM1-201ENST00000278833 TPRKBQ9Y3C4 175 aa24.19■■□□□ 1.46
ROM1-201ENST00000278833 ZNF99A8MXY4 864 aaPredicted RBP24.18■■□□□ 1.46
ROM1-201ENST00000278833 PSMD11O00231 422 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 NPC1O15118 1278 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 PFDN1O60925 122 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 GABARAPO95166 117 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 PCGF2P35227 344 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 CLK3P49761 638 aaKnown RBP24.18■■□□□ 1.46
ROM1-201ENST00000278833 CCR3P51677 355 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 GP2P55259 537 aaKnown RBP24.18■■□□□ 1.46
ROM1-201ENST00000278833 SLC35A2P78381 396 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 MVKQ03426 396 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 BNIP3Q12983 259 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 SYTL3Q4VX76 610 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 LRRC73Q5JTD7 316 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 GLYATL1Q969I3 302 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 TMEM159Q96B96 161 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 OTUB2Q96DC9 234 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 OR4K3Q96R72 315 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 EPYCQ99645 322 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 APOL4Q9BPW4 351 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 CCM2Q9BSQ5 444 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 RIOK2Q9BVS4 552 aaKnown RBP24.18■■□□□ 1.46
ROM1-201ENST00000278833 NKX2-4Q9H2Z4 354 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 TPT1P8Q9HAU6 139 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 CCNB1IP1Q9NPC3 277 aa24.18■■□□□ 1.46
ROM1-201ENST00000278833 MTX2O75431 263 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 LINC00271P0C7V0 271 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 TYRP14679 529 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 HPCAL1P37235 193 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 ELOAQ14241 798 aaKnown RBP24.17■■□□□ 1.46
ROM1-201ENST00000278833 ZNF77Q15935 545 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 FAR1Q8WVX9 515 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 HSH2DQ96JZ2 352 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 ATP6V1HQ9UI12 483 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 ERVK-11Q9UQG0 969 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 IRAK3Q9Y616 596 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 MYOFQ9NZM1 2061 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 LINC01553A4QN01 128 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 MOSPD3O75425 235 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 LEFTY1O75610 366 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 IMPA1P29218 277 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 MMP12P39900 470 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 ETV3P41162 512 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 VLDLRP98155 873 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 ZNF621Q6ZSS3 439 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 SPRED2Q7Z698 418 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 VPS37AQ8NEZ2 397 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 GOT1L1Q8NHS2 421 aaPredicted RBP24.17■■□□□ 1.46
ROM1-201ENST00000278833 MIPOL1Q8TD10 442 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 ZNF282Q9UDV7 671 aaPredicted RBP24.17■■□□□ 1.46
ROM1-201ENST00000278833 U3KQV3 271 aa24.17■■□□□ 1.46
ROM1-201ENST00000278833 MYO9BQ13459 2157 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 RNASET2O00584 256 aaKnown RBP24.16■■□□□ 1.46
ROM1-201ENST00000278833 TSPAN6O43657 245 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 NDUFS2O75306 463 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 SRPRAP08240 638 aaKnown RBP24.16■■□□□ 1.46
ROM1-201ENST00000278833 LAMP1P11279 417 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 HTR1BP28222 390 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 TIA1P31483 386 aaKnown RBP eCLIP24.16■■□□□ 1.46
ROM1-201ENST00000278833 PXNP49023 591 aaPredicted RBP24.16■■□□□ 1.46
ROM1-201ENST00000278833 C21orf59P57076 290 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 IL5RAQ01344 420 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 PPP1R8Q12972 351 aaKnown RBP24.16■■□□□ 1.46
ROM1-201ENST00000278833 TEAD4Q15561 434 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 ZNF805Q5CZA5 627 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 TMEM215Q68D42 235 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 B3GNT8Q7Z7M8 397 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 TSPYL5Q86VY4 417 aaPredicted RBP24.16■■□□□ 1.46
ROM1-201ENST00000278833 HORMAD1Q86X24 394 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 NPAS3Q8IXF0 933 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 RASGEF1AQ8N9B8 481 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 ZFP90Q8TF47 636 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 REPS1Q96D71 796 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 PLEKHA8Q96JA3 519 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 SGK2Q9HBY8 427 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 FBXO10Q9UK96 956 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 PADI2Q9Y2J8 665 aa24.16■■□□□ 1.46
ROM1-201ENST00000278833 MITFO75030 526 aaPredicted RBP24.15■■□□□ 1.46
ROM1-201ENST00000278833 CBFA2T3O75081 653 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 C9P02748 559 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 POLR2EP19388 210 aaKnown RBP24.15■■□□□ 1.46
ROM1-201ENST00000278833 NAE1Q13564 534 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 BCL7AQ4VC05 210 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 ARHGAP15Q53QZ3 475 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 CPTPQ5TA50 214 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 NLRP8Q86W28 1048 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 CLECL1Q8IZS7 167 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 C7orf34Q96L11 122 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 BARD1Q99728 777 aaKnown RBP24.15■■□□□ 1.46
ROM1-201ENST00000278833 GABARAPL3Q9BY60 117 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms