RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SRFP11831 508 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 AMD1P17707 334 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 PFKLP17858 780 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 PRKACGP22612 351 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 CCR7P32248 378 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 RXRGP48443 463 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 SNRPD1P62314 119 aaKnown RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 SLC35A2P78381 396 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 IL5RAQ01344 420 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 SFSWAPQ12872 951 aaKnown RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 CSTF3Q12996 717 aaKnown RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 RAPSNQ13702 412 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 MPPE1Q53F39 396 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 SYT6Q5T7P8 510 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 LIPJQ5W064 366 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 FRG2Q64ET8 278 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 BMP8AQ7Z5Y6 402 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 ADGRG2Q8IZP9 1017 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 SVOPQ8N4V2 548 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 FBXL6Q8N531 539 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 TMEM105Q8N8V8 129 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 FLCNQ8NFG4 579 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 OR8J2Q8NGG1 315 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 OR6K2Q8NGY2 324 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 CLHC1Q8NHS4 586 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 FIBINQ8TAL6 211 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 WFDC5Q8TCV5 224 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 FAR1Q8WVX9 515 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 ITPKCQ96DU7 683 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 FRG2BQ96QU4 278 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 MCCC1Q96RQ3 725 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 INPP5KQ9BT40 448 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 DGCR6LQ9BY27 220 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 DNAJC11Q9NVH1 559 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 FAM120CQ9NX05 1096 aaKnown RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 INTS6Q9UL03 887 aaKnown RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 PPT2Q9UMR5 302 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 FUOMA2VDF0 154 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 NPIPB15A6NHN6 443 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 PTGES3LE9PB15 166 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 ZSCAN9O15535 394 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 ZNF821O75541 412 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 FABP3P05413 133 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 JUPP14923 745 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 CYP2A7P20853 494 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 SERPINB10P48595 397 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 AQP6Q13520 282 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 SPCS2Q15005 226 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 PGS1Q32NB8 556 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 SLC44A4Q53GD3 710 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 NOXRED1Q6NXP6 359 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 NEK5Q6P3R8 708 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 DOK6Q6PKX4 331 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 VITQ6UXI7 678 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 MBOAT1Q6ZNC8 495 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 MTSS1LQ765P7 747 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 CYP4Z1Q86W10 505 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 OR7A2PQ8NGA2 310 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 MCOLN3Q8TDD5 553 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 SNRNP27Q8WVK2 155 aaKnown RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 IPCEF1Q8WWN9 437 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 SGCDQ92629 289 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 MTFMTQ96DP5 389 aaKnown RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 ZNF641Q96N77 438 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 TSSK3Q96PN8 268 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 CPEB1Q9BZB8 566 aaKnown RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 ASPSCR1Q9BZE9 553 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 PAK1IP1Q9NWT1 392 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 NDRG4Q9ULP0 352 aaKnown RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 ZNF106Q9H2Y7 1883 aaKnown RBP12.48□□□□□ -0.41
C9orf3-201ENST00000277198 CLIC1O00299 241 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 INMTO95050 263 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 EPN2O95208 641 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 KCNK5O95279 499 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 FTH1P02794 183 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 MYCLP1P12525 358 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-201ENST00000277198 HSD3B1P14060 373 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 PPIBP23284 216 aaKnown RBP12.48□□□□□ -0.41
C9orf3-201ENST00000277198 HSD3B2P26439 372 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 KDELR2P33947 212 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 GRK3P35626 688 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 BCAP31P51572 246 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 PCDH1Q08174 1060 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 PTCHD3Q3KNS1 767 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 TXNDC8Q6A555 127 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 HTR3DQ70Z44 454 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 CBLL1Q75N03 491 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 EIF3MQ7L2H7 374 aaKnown RBP12.48□□□□□ -0.41
C9orf3-201ENST00000277198 GPR155Q7Z3F1 870 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 C10orf111Q8N326 155 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 SMARCD2Q92925 531 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 NXPE3Q969Y0 559 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 EPS8L2Q9H6S3 715 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 ANKHQ9HCJ1 492 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 LTB4R2Q9NPC1 389 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 CORO2BQ9UQ03 480 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 TDRKHQ9Y2W6 561 aaKnown RBP12.48□□□□□ -0.41
C9orf3-201ENST00000277198 CORINQ9Y5Q5 1042 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 CPQQ9Y646 472 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 U3KQV3 271 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms