RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 PEX16Q9Y5Y5 336 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 NPEPPSL1A6NEC2 478 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 DRGXA6NNA5 263 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 GALR2O43603 387 aaPredicted RBP10□□□□□ -0.81
UPF3B-201ENST00000276201 FTH1P02794 183 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 PSMB9P28065 219 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 DNAJA1P31689 397 aaKnown RBP10□□□□□ -0.81
UPF3B-201ENST00000276201 AGTR2P50052 363 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 VAC14Q08AM6 782 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 ABHD18Q0P651 414 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 CCINQ13939 588 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 MAPKAPK3Q16644 382 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 LAIR1Q6GTX8 287 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 ZNF544Q6NX49 715 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 C12orf40Q86WS4 652 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 DENND1CQ8IV53 801 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 FAM9CQ8IZT9 166 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 PGBD5Q8N414 524 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 POC5Q8NA72 575 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 SIMC1Q8NDZ2 872 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 ACOX2Q99424 681 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 P2RY13Q9BPV8 354 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 POLR1EQ9GZS1 481 aaKnown RBP10□□□□□ -0.81
UPF3B-201ENST00000276201 KCNH6Q9H252 994 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 TP63Q9H3D4 680 aaPredicted RBP10□□□□□ -0.81
UPF3B-201ENST00000276201 PIF1Q9H611 641 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 LMAN1LQ9HAT1 526 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 SLC25A37Q9NYZ2 338 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 SLCO3A1Q9UIG8 710 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 FBXO10Q9UK96 956 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 PCDHGA3Q9Y5H0 932 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 GMPPBQ9Y5P6 360 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 SCN8AQ9UQD0 1980 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 J3KR12 359 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 BTN3A1O00481 513 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 HOXC11O43248 304 aaPredicted RBP9.99□□□□□ -0.81
UPF3B-201ENST00000276201 RGS14O43566 566 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 OTCP00480 354 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 PKMP14618 531 aaKnown RBP9.99□□□□□ -0.81
UPF3B-201ENST00000276201 TCEA1P23193 301 aaKnown RBP9.99□□□□□ -0.81
UPF3B-201ENST00000276201 FMO3P31513 532 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 DAPP51397 102 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 ARHGDIAP52565 204 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 NUBP1P53384 320 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 MESP2Q0VG99 397 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 TAF1AQ15573 450 aaPredicted RBP9.99□□□□□ -0.81
UPF3B-201ENST00000276201 AP5B1Q2VPB7 878 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 PIK3R6Q5UE93 754 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 KIAA1614Q5VZ46 1190 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 ANKRD34AQ69YU3 496 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 OR2T5Q6IEZ7 315 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 LETMD1Q6P1Q0 360 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 FAHD1Q6P587 224 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 SLC46A3Q7Z3Q1 461 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 TRIM46Q7Z4K8 759 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 SNX29P2Q8IUI4 249 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 OR2T29Q8NH02 315 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 CHTF18Q8WVB6 975 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 KCNJ9Q92806 393 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 GPR21Q99679 349 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 GABARAPL3Q9BY60 117 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 CHRDQ9H2X0 955 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 IL1RAPQ9NPH3 570 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.99□□□□□ -0.81
UPF3B-201ENST00000276201 EIF2B4Q9UI10 523 aaKnown RBP9.99□□□□□ -0.81
UPF3B-201ENST00000276201 POLR3HQ9Y535 204 aaPredicted RBP9.99□□□□□ -0.81
UPF3B-201ENST00000276201 CACNA1HO95180 2353 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 KIAA1549LQ6ZVL6 1849 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 PSMD11O00231 422 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 FAM20BO75063 409 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 CCNDBP1O95273 360 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 KRT75O95678 551 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 EGFP01133 1207 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 CAPN1P07384 714 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 RCVRNP35243 200 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 CTSKP43235 329 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 SLC6A11P48066 632 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 KRT6CP48668 564 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 PRIM2P49643 509 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 DGKQP52824 942 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 IL2P60568 153 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 ITKQ08881 620 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 ELP6Q0PNE2 266 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 TCF15Q12870 199 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 LRRC32Q14392 662 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 NR6A1Q15406 480 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 Q6ZS52 159 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 ETFBKMTQ8IXQ9 262 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 FAM217AQ8IXS0 508 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 PAF1Q8N7H5 531 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 CDYL2Q8N8U2 506 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 METTL6Q8TCB7 284 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 UBTD2Q8WUN7 234 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 THUMPD3Q9BV44 507 aaKnown RBP9.99□□□□□ -0.81
UPF3B-201ENST00000276201 ABCB10Q9NRK6 738 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 MARK1Q9P0L2 795 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 TRMT6Q9UJA5 497 aaKnown RBP9.99□□□□□ -0.81
UPF3B-201ENST00000276201 INVSQ9Y283 1065 aa9.99□□□□□ -0.81
UPF3B-201ENST00000276201 NPIPB8E9PQR5 432 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 CCL22O00626 93 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms