RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ZBTB20Q9HC78 741 aaPredicted RBP15.26■□□□□ 0.03
USE1-201ENST00000263897 C14orf105Q9NVL8 296 aa15.26■□□□□ 0.03
USE1-201ENST00000263897 NSMCE4AQ9NXX6 385 aa15.26■□□□□ 0.03
USE1-201ENST00000263897 IKZF3Q9UKT9 509 aa15.26■□□□□ 0.03
USE1-201ENST00000263897 NOVA2Q9UNW9 492 aaKnown RBP15.26■□□□□ 0.03
USE1-201ENST00000263897 B3GNT3Q9Y2A9 372 aa15.26■□□□□ 0.03
USE1-201ENST00000263897 USP9XQ93008 2570 aaPredicted RBP15.26■□□□□ 0.03
USE1-201ENST00000263897 CLEC18AA5D8T8 446 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 H0YIG0 161 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 EIF3HO15372 352 aaKnown RBP eCLIP15.25■□□□□ 0.03
USE1-201ENST00000263897 VPS4BO75351 444 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 GUCA1CO95843 209 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 HPP00738 406 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 ZNF37AP17032 561 aaPredicted RBP15.25■□□□□ 0.03
USE1-201ENST00000263897 CXCR2P25025 360 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 VARSP26640 1264 aaKnown RBP15.25■□□□□ 0.03
USE1-201ENST00000263897 GRK3P35626 688 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 BCL6P41182 706 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 TAS2R39P59534 338 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 Q0VFX4 171 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 ILF2Q12905 390 aaKnown RBP15.25■□□□□ 0.03
USE1-201ENST00000263897 UBAP2LQ14157 1087 aaKnown RBP15.25■□□□□ 0.03
USE1-201ENST00000263897 SYT16Q17RD7 645 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 AGAP7PQ5VUJ5 663 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 IRAK1BP1Q5VVH5 260 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 SBSNQ6UWP8 590 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 CLEC18BQ6UXF7 455 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 SYT10Q6XYQ8 523 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 CYS1Q717R9 158 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 CAMKVQ8NCB2 501 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 CLEC18CQ8NCF0 446 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 OR9A4Q8NGU2 314 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 SLC13A3Q8WWT9 602 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 THOC3Q96J01 351 aaKnown RBP15.25■□□□□ 0.03
USE1-201ENST00000263897 VPS39Q96JC1 886 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 AGAP4Q96P64 663 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 OR4K3Q96R72 315 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 MACROD1Q9BQ69 325 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 MCMBPQ9BTE3 642 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 SARGQ9BW04 601 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 LHPPQ9H008 270 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 RHOJQ9H4E5 214 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 SAYSD1Q9NPB0 183 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 SMYD2Q9NRG4 433 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 GRHL1Q9NZI5 618 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 VPS4AQ9UN37 437 aa15.25■□□□□ 0.03
USE1-201ENST00000263897 A0A1W2PQ72 361 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 CDC7O00311 574 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 MAP2K7O14733 419 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 PCDH17O14917 1159 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 PIAS1O75925 651 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 NSA2O95478 260 aaKnown RBP15.24■□□□□ 0.03
USE1-201ENST00000263897 HEXBP07686 556 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 SSTR1P30872 391 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 CCR8P51685 355 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 MAT1AQ00266 395 aaKnown RBP15.24■□□□□ 0.03
USE1-201ENST00000263897 SRSF1Q07955 248 aaKnown RBP eCLIP15.24■□□□□ 0.03
USE1-201ENST00000263897 C2orf54Q08AI8 447 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 PPP1R3AQ16821 1122 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 PRR30Q53SZ7 412 aaPredicted RBP15.24■□□□□ 0.03
USE1-201ENST00000263897 TMEM214Q6NUQ4 689 aaKnown RBP15.24■□□□□ 0.03
USE1-201ENST00000263897 IGFL2Q6UWQ7 119 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 Q6ZS92 163 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 CAPN12Q6ZSI9 719 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 NDUFAF7Q7L592 441 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 ASPGQ86U10 573 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 CEP97Q8IW35 865 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 ZC3H7AQ8IWR0 971 aaKnown RBP15.24■□□□□ 0.03
USE1-201ENST00000263897 MFSD9Q8NBP5 474 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 KCT2Q8NC54 265 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 ZNF160Q9HCG1 818 aa15.24■□□□□ 0.03
USE1-201ENST00000263897 CXorf49A8MYA2 514 aaPredicted RBP15.23■□□□□ 0.03
USE1-201ENST00000263897 BMP10O95393 424 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 CSHL1Q14406 222 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 ZNF460Q14592 562 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 FAAH2Q6GMR7 532 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 C3orf62Q6ZUJ4 267 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 PRSS41Q7RTY9 318 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 IQCKQ8N0W5 287 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 ANKRD49Q8WVL7 239 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 POPDC3Q9HBV1 291 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 MKL2Q9ULH7 1088 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 MTO1Q9Y2Z2 717 aaKnown RBP15.23■□□□□ 0.03
USE1-201ENST00000263897 UTP11Q9Y3A2 253 aaKnown RBP15.23■□□□□ 0.03
USE1-201ENST00000263897 SLC22A7Q9Y694 548 aa15.23■□□□□ 0.03
USE1-201ENST00000263897 USP9YO00507 2555 aaPredicted RBP15.22■□□□□ 0.03
USE1-201ENST00000263897 LOC102723996A0A087X1L8 192 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 NSG1A0A0A6YYJ2 146 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 TRBC2A0A5B9 178 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 OR1F1O43749 312 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 GSTA2P09210 222 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 COX6A1P12074 109 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 IL1RNP18510 177 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 GNLYP22749 145 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 UQCRFS1P47985 274 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 PLTPP55058 493 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 CDKL1Q00532 357 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 POU4F1Q01851 419 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 MEF2AQ02078 507 aaPredicted RBP15.22■□□□□ 0.03
USE1-201ENST00000263897 CRB2Q5IJ48 1285 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms