RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 IFI44Q8TCB0 444 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 CATSPER2Q96P56 530 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 TGM7Q96PF1 710 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 NTMT1Q9BV86 223 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 ATXN7L1Q9ULK2 861 aaPredicted RBP26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 TRAF6Q9Y4K3 522 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 C2orf74A8MZ97 194 aa26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 CLDN9O95484 217 aa26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 PTDSS1P48651 473 aaKnown RBP26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 COL9A2Q14055 689 aaPredicted RBP26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 ARMC6Q6NXE6 501 aa26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 SPESP1Q6UW49 350 aa26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 NXPE4Q6UWF7 544 aa26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 NAXDQ8IW45 347 aa26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 MTFMTQ96DP5 389 aaKnown RBP26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 AHCYL2Q96HN2 611 aaKnown RBP26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 DPH7Q9BTV6 452 aa26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 SYNDIG1Q9H7V2 258 aa26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 NKX1-2Q9UD57 310 aaPredicted RBP26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 UNC13CQ8NB66 2214 aa26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 RIF1Q5UIP0 2472 aaKnown RBP26.41■■□□□ 1.82
SMARCD3-201ENST00000262188 FEZF1A0PJY2 475 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 CAPN5O15484 640 aaPredicted RBP26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 LDOC1O95751 146 aaPredicted RBP26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 MAGP20916 626 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 CD1CP29017 333 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 GRIA3P42263 894 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 HTR6P50406 440 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 SPDYAQ5MJ70 313 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 ZNF554Q86TJ5 538 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 GFM2Q969S9 779 aaKnown RBP26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 PCBD2Q9H0N5 130 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 FARSBQ9NSD9 589 aaKnown RBP26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 TUBA8Q9NY65 449 aaPredicted RBP26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 GPRC5BQ9NZH0 403 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 BTRCQ9Y297 605 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 HEATR5BQ9P2D3 2071 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 KCNE1BA0A087WTH5 132 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 PROB1E7EW31 1015 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 RPL14P50914 215 aaKnown RBP26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 CCL7P80098 99 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 GALNT1Q10472 559 aaPredicted RBP26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 SLBPQ14493 270 aaKnown RBP eCLIP26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 NR1D2Q14995 579 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 SGO1Q5FBB7 561 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 TMPRSS9Q7Z410 1059 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 NUDT22Q9BRQ3 303 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 OCEL1Q9H607 264 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 NPHS2Q9NP85 383 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 NDUFA13Q9P0J0 144 aa26.4■■□□□ 1.82
SMARCD3-201ENST00000262188 DMXL1Q9Y485 3027 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 GIPC1O14908 333 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 AZIN1O14977 448 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 CRCPO75575 148 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 EBLN1P0CF75 366 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 C1GALT1C1LP0DN25 315 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 EPHA4P54764 986 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 PKNOX1P55347 436 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 VWA5B1Q5TIE3 1220 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 MAVSQ7Z434 540 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 RFWD2Q8NHY2 731 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 METTL6Q8TCB7 284 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 GRAMD1AQ96CP6 724 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 MAP3K3Q99759 626 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 SYNPO2LQ9H987 977 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 POMT2Q9UKY4 750 aa26.39■■□□□ 1.82
SMARCD3-201ENST00000262188 A0A1W2PQM1 296 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 HGFP14210 728 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 CMPK1P30085 196 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 GPR3P46089 330 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 NEK2P51955 445 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 L3MBTL4Q8NA19 623 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 FCRL4Q96PJ5 515 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 TBCCD1Q9NVR7 557 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 FTSJ1Q9UET6 329 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 HAO1Q9UJM8 370 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 AGRPO00253 132 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 STATHP02808 62 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 SESN3P58005 492 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 CSNK1G2P78368 415 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 SLC14A1Q13336 389 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 UGT3A2Q3SY77 523 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 CCDC157Q569K6 752 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 SNAP47Q5SQN1 464 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 STPG1Q5TH74 334 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 KANK2Q63ZY3 851 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 ATG9BQ674R7 924 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 NCCRP1Q6ZVX7 275 aaPredicted RBP26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 PIWIL2Q8TC59 973 aaKnown RBP26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 SLC22A18Q96BI1 424 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 DCTN4Q9UJW0 460 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 ENTPD2Q9Y5L3 495 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 DNAJC15Q9Y5T4 150 aa26.38■■□□□ 1.81
SMARCD3-201ENST00000262188 ZNF292O60281 2723 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 RPLP0P05388 317 aaKnown RBP26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 RASSF2P50749 326 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 NAA20P61599 178 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 ZIC1Q15915 447 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 INAVAQ3KP66 663 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms