RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ATXN7L3Q14CW9 347 aaPredicted RBP13.9□□□□□ -0.18
CUX2-201ENST00000261726 SH3PXD2AQ5TCZ1 1133 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 AADACL4Q5VUY2 407 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 EBF4Q9BQW3 602 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 ERVK-6Q9BXR3 956 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 PCDHGB2Q9Y5G2 931 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 CACNA1FO60840 1977 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 CDRT1O95170 752 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 ZNF41P51814 821 aaPredicted RBP13.9□□□□□ -0.18
CUX2-201ENST00000261726 SMSP52788 366 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 MLLT10P55197 1068 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 ERVK-8P63133 956 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 PDGFRLQ15198 375 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 C1orf52Q8N6N3 182 aaKnown RBP13.9□□□□□ -0.18
CUX2-201ENST00000261726 OR10Q1Q8NGQ4 319 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 GEMIN6Q8WXD5 167 aaKnown RBP13.9□□□□□ -0.18
CUX2-201ENST00000261726 STON2Q8WXE9 905 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 DNAJA3Q96EY1 480 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 TMEM121BQ9BXQ6 578 aaPredicted RBP13.9□□□□□ -0.18
CUX2-201ENST00000261726 FANCFQ9NPI8 374 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 CRTAC1Q9NQ79 661 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 SH2B3Q9UQQ2 575 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 FAM208AQ9UK61 1670 aaKnown RBP13.9□□□□□ -0.18
CUX2-201ENST00000261726 TRBC2A0A5B9 178 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 HAS3O00219 553 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 PEX12O00623 359 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 SOX14O95416 240 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 CCNHP51946 323 aaPredicted RBP13.9□□□□□ -0.19
CUX2-201ENST00000261726 CLRN1P58418 232 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 DAOAP59103 153 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 ZNF792Q3KQV3 632 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 ALG10BQ5I7T1 473 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 PDSS1Q5T2R2 415 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 LRRC66Q68CR7 880 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 PAQR3Q6TCH7 311 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 OR8K3Q8NH51 312 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 LMX1AQ8TE12 382 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 RIPK3Q9Y572 518 aa13.9□□□□□ -0.19
CUX2-201ENST00000261726 TNFRSF10BO14763 440 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 ADAMTS3O15072 1205 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 H6PDO95479 791 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 TBX18O95935 607 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 ZNF12P17014 697 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 UGT8Q16880 541 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 AQP11Q8NBQ7 271 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 OR4E2Q8NGC2 313 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 COQ8AQ8NI60 647 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 AUTS2Q8WXX7 1259 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 SEC14L1Q92503 715 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 C12orf43Q96C57 262 aaKnown RBP13.89□□□□□ -0.19
CUX2-201ENST00000261726 TRIM36Q9NQ86 728 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 KCND1Q9NSA2 647 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 MATN2O00339 956 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 RAB36O95755 333 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 GBAP04062 536 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 TLE2Q04725 743 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 TRMT10BQ6PF06 316 aaKnown RBP13.89□□□□□ -0.19
CUX2-201ENST00000261726 METTL27Q8N6F8 245 aaPredicted RBP13.89□□□□□ -0.19
CUX2-201ENST00000261726 CLDND1Q9NY35 253 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 SLC22A14Q9Y267 594 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 A0A1B0GVI7 797 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 BMP8BP34820 402 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 HSD17B2P37059 387 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 RNF144AP50876 292 aaPredicted RBP13.89□□□□□ -0.19
CUX2-201ENST00000261726 CNPY1Q3B7I2 92 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 PLEKHG6Q3KR16 790 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 NKAPLQ5M9Q1 402 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 BMP8AQ7Z5Y6 402 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 GPAT4Q86UL3 456 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 LAMP5Q9UJQ1 280 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 KCNIP3Q9Y2W7 256 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 NEMP2A6NFY4 417 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 SLC7A4O43246 635 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 COQ9O75208 318 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 SIX3O95343 332 aaPredicted RBP13.89□□□□□ -0.19
CUX2-201ENST00000261726 HTR1AP08908 422 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 PRPS1L1P21108 318 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 GNRHRP30968 328 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 SNTA1Q13424 505 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 CAMKVQ8NCB2 501 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 TFAP2BQ92481 460 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 OR10A4Q9H209 315 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 ECI2O75521 394 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 PSMA6P60900 246 aaKnown RBP13.89□□□□□ -0.19
CUX2-201ENST00000261726 DAG1Q14118 895 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 TMEM198Q66K66 360 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 CCM2Q9BSQ5 444 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 SUV39H2Q9H5I1 410 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 TFB2MQ9H5Q4 396 aaKnown RBP13.89□□□□□ -0.19
CUX2-201ENST00000261726 MTMR10Q9NXD2 777 aa13.89□□□□□ -0.19
CUX2-201ENST00000261726 YJEFN3A6XGL0 299 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 I3L521 148 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 RNF13O43567 381 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 GP1BBP13224 206 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 FNTBP49356 437 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 RPS24P62847 133 aaKnown RBP13.88□□□□□ -0.19
CUX2-201ENST00000261726 ECH1Q13011 328 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 HNRNPDQ14103 355 aaKnown RBP13.88□□□□□ -0.19
CUX2-201ENST00000261726 NKD2Q969F2 451 aaPredicted RBP13.88□□□□□ -0.19
CUX2-201ENST00000261726 POFUT2Q9Y2G5 429 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms