RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 MT-ND2P03891 347 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FGF4P08620 206 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 RHCEP18577 417 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NT5EP21589 574 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TLE2Q04725 743 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CBX3Q13185 183 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MTM1Q13496 603 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 C5orf22Q49AR2 442 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FAM205BPQ63HN1 556 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SYCE2Q6PIF2 218 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NRROSQ86YC3 692 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GNPDA2Q8TDQ7 276 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SNX33Q8WV41 574 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TEPSINQ96N21 525 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 COL21A1Q96P44 957 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MNTQ99583 582 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 REXO4Q9GZR2 422 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CHRAC1Q9NRG0 131 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PAK1IP1Q9NWT1 392 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ARMCX1Q9P291 453 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PACSIN3Q9UKS6 424 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 C1orf226A1L170 272 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PDLIM1O00151 329 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PCCBP05166 539 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 KCNA5P22460 613 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 HMGCLP35914 325 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 KCNJ8Q15842 424 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FAM174BQ3ZCQ3 159 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GPAT4Q86UL3 456 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 AMIGO1Q86WK6 493 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NPAS3Q8IXF0 933 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GLIS3Q8NEA6 775 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PDLIM5Q96HC4 596 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TM9SF2Q99805 663 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PAIP1Q9H074 479 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MED31Q9Y3C7 131 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 HCN4Q9Y3Q4 1203 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ASB4Q9Y574 426 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PCDHB3Q9Y5E6 796 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ELOA3DA6NLF2 546 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MANBAO00462 879 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 STBD1O95210 358 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GADD45GO95257 159 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 IL7RP16871 459 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 STOMP27105 288 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NMBRP28336 390 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 BMP8BP34820 402 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF169Q14929 603 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ELOA3BQ3SY89 546 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ZBED5Q49AG3 693 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CRTC3Q6UUV7 619 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 BMP8AQ7Z5Y6 402 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ERI1Q8IV48 349 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TNS4Q8IZW8 715 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 POU5F2Q8N7G0 328 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ELOA3Q8NG57 546 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MCFD2Q8NI22 146 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NMUR2Q9GZQ4 415 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 XYLT2Q9H1B5 865 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FOCADQ5VW36 1801 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF670-ZNF695F2Z2N8 137 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ENPP3O14638 875 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CASC3O15234 703 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 LRRTM2O43300 516 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MSI1O43347 362 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CSPG5O95196 566 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PGRP06401 933 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GP1BBP13224 206 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 RNH1P13489 461 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 S100A1P23297 94 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ACSL1P33121 698 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SLC15A1P46059 708 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 DNASE1L1P49184 302 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MRPS21P82921 87 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 KIR2DS3Q14952 304 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CTC1Q2NKJ3 1217 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 C17orf99Q6UX52 265 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF367Q7RTV3 350 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NAT16Q8N8M0 369 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ENDOVQ8N8Q3 282 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SLC22A8Q8TCC7 542 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 KCTD7Q96MP8 289 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CEP41Q9BYV8 373 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ASB6Q9NWX5 421 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MCM8Q9UJA3 840 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 R3HDM2Q9Y2K5 976 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 LYVE1Q9Y5Y7 322 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF726A6NNF4 738 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 IQCF3P0C7M6 154 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TYRP14679 529 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF37AP17032 561 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CBLBQ13191 982 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NFATC2Q13469 925 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PON3Q15166 354 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PITRM1Q5JRX3 1037 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GALNT12Q8IXK2 581 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 RBM15BQ8NDT2 890 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FAM46DQ8NEK8 389 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 KLHDC7BQ96G42 594 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CD180Q99467 661 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms