RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PDCD4Q53EL6 469 aaKnown RBP11.76□□□□□ -0.53
COL8A1-201ENST00000261037 GPALPP1Q8IXQ4 340 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 OR9I1Q8NGQ6 314 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 GEMIN6Q8WXD5 167 aaKnown RBP11.76□□□□□ -0.53
COL8A1-201ENST00000261037 STON2Q8WXE9 905 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF514Q96K75 400 aaPredicted RBP11.76□□□□□ -0.53
COL8A1-201ENST00000261037 CNDP2Q96KP4 475 aaKnown RBP11.76□□□□□ -0.53
COL8A1-201ENST00000261037 TAS2R1Q9NYW7 299 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 BLOC1S5-TXNDC5H3BN57 136 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 PLOD2O00469 737 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 ACOX3O15254 700 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 ITGA10O75578 1167 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 HK1P19367 917 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 PRKACGP22612 351 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 SDR16C5Q8N3Y7 309 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 OR4K17Q8NGC6 315 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 HSH2DQ96JZ2 352 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 PARPBPQ9NWS1 579 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 TNFRSF10DQ9UBN6 386 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 C2orf92A0A1B0GVN3 265 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 APOC1P02654 83 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 SLC2A2P11168 524 aaPredicted RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 CHRM1P11229 460 aaPredicted RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 HOXB2P14652 356 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 EEFSECP57772 596 aaKnown RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 OR2B6P58173 313 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 SPIN3Q5JUX0 258 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 SLITRK4Q8IW52 837 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF101Q8IZC7 436 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 PHOSPHO1Q8TCT1 267 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 LDAHQ9H6V9 325 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 TLR9Q9NR96 1032 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 ANKRD66B4E2M5 251 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 H6PDO95479 791 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 AGTR2P50052 363 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 C22orf39Q6P5X5 142 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 BRAT1Q6PJG6 821 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 SETD7Q8WTS6 366 aaKnown RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 NTPCRQ9BSD7 190 aaKnown RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 EFCAB11Q9BUY7 163 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 BTBD1Q9H0C5 482 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 SMOC2Q9H3U7 446 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 METTL7AQ9H8H3 244 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 TXNRD2Q9NNW7 524 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 INSL6Q9Y581 213 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 OR2AT4A6NND4 320 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 TTC34A8MYJ7 566 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 SLC22A2O15244 555 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 ANXA8P13928 327 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 NDUFS1P28331 727 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 HCAR3P49019 387 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 GHRHRQ02643 423 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 RIN1Q13671 783 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 NPY5RQ15761 445 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 ZC3HC1Q86WB0 502 aaKnown RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 OR2L8Q8NGY9 312 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 SMURF2Q9HAU4 748 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 A0A1W2PQ45 241 aaPredicted RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 A0A1W2PQY0 241 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 TEX46H3BTG2 121 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 AKAP8O43823 692 aaKnown RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 CAPZA1P52907 286 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF776Q68DI1 518 aaPredicted RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 RNF130Q86XS8 419 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 JAGN1Q8N5M9 183 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 SLC5A11Q8WWX8 675 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 KCTD7Q96MP8 289 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF641Q96N77 438 aaPredicted RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 SMOQ99835 787 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 WDR77Q9BQA1 342 aaPredicted RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 MAF1Q9H063 256 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 METTL8Q9H825 291 aaKnown RBP11.75□□□□□ -0.53
COL8A1-201ENST00000261037 TDP1Q9NUW8 608 aa11.75□□□□□ -0.53
COL8A1-201ENST00000261037 E7EQ34 232 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 ABLIM1O14639 778 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 TACSTD2P09758 323 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 S100A10P60903 97 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 MLLT1Q03111 559 aaPredicted RBP11.74□□□□□ -0.53
COL8A1-201ENST00000261037 HMGN2P46Q86SG4 172 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 TMEM110Q86TL2 294 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 DNAJB8Q8NHS0 232 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF384Q8TF68 577 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 TFGQ92734 400 aaPredicted RBP11.74□□□□□ -0.53
COL8A1-201ENST00000261037 ASB9Q96DX5 294 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 PEBP4Q96S96 227 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 PKP2Q99959 881 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 BCO2Q9BYV7 579 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 SLC7A8Q9UHI5 535 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 DKKL1Q9UK85 242 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 BAIAP2Q9UQB8 552 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 COQ4Q9Y3A0 265 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 NOX1Q9Y5S8 564 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 CDC123O75794 336 aaPredicted RBP11.74□□□□□ -0.53
COL8A1-201ENST00000261037 GRK5P34947 590 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 SNX29P2Q8IUI4 249 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 MND1Q9BWT6 205 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 ITM2CQ9NQX7 267 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 PLEKHA6Q9Y2H5 1048 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 INSL5Q9Y5Q6 135 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms