RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 OR8S1Q8NH09 359 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 RFT1Q96AA3 541 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 CNDP2Q96KP4 475 aaKnown RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 C12orf66Q96MD2 445 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 COMMD4Q9H0A8 199 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 RAB6CQ9H0N0 254 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 NANOGQ9H9S0 305 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 NLKQ9UBE8 527 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 TNFRSF10DQ9UBN6 386 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 MGAT4AQ9UM21 535 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 TBC1D3BA6NDS4 549 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 GABRDO14764 452 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 OR1I1O60431 355 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 FGFBP1Q14512 234 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PCBP2Q15366 365 aaKnown RBP eCLIP9.48□□□□□ -0.891e-6■■■■■ 27.4
CTDSPL2-201ENST00000260327 VMACQ2NL98 169 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ANKRD54Q6NXT1 300 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 TAS1R3Q7RTX0 852 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 SAMD12Q8N8I0 201 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 NFKBIDQ8NI38 313 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 SOCS4Q8WXH5 440 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZSWIM3Q96MP5 696 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLC35A5Q9BS91 424 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF282Q9UDV7 671 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 FBXO10Q9UK96 956 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PADI3Q9ULW8 664 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 TRBC2A0A5B9 178 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 CLCA1A8K7I4 914 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 OGNP20774 298 aaKnown RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 EDNRAP25101 427 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 RGS19P49795 217 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PGDP52209 483 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PRKCDQ05655 676 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 TCEANCQ8N8B7 351 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF248Q8NDW4 579 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZFP90Q8TF47 636 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 GPN3Q9UHW5 284 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 SIX4Q9UIU6 781 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 FARSAQ9Y285 508 aaKnown RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 E7ESA3 106 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 RPP14O95059 124 aaKnown RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 ESR1P03372 595 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 CD2P06729 351 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 PTGER3P43115 390 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 TAF1AQ15573 450 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 C22orf42Q6IC83 251 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 QSOX2Q6ZRP7 698 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 Q8N9G6 341 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 OR13J1Q8NGT2 312 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 OR2L2Q8NH16 312 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 GAB3Q8WWW8 586 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 CREB3L1Q96BA8 519 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 LGR4Q9BXB1 951 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF700Q9H0M5 742 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 RNF39Q9H2S5 420 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 FAM118AQ9NWS6 357 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 MRPL15Q9P015 296 aaKnown RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 GTF2IRD1Q9UHL9 959 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 FBXW2Q9UKT8 454 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 KCPQ6ZWJ8 1503 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 LMO7Q8WWI1 1683 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 HLA-DPB1P04440 258 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 ACADMP11310 421 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 GDF5P43026 501 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 OR12D2P58182 307 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 MAP2K5Q13163 448 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 C3orf58Q8NDZ4 430 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 ARL6Q9H0F7 186 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 TMEM185BQ9H7F4 350 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 CYTH4Q9UIA0 394 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 NEDD8-MDP1E9PL57 170 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 XKRYO14609 159 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 RLN2P04090 185 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 STSP08842 583 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 PVALBP20472 110 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 CCL23P55773 120 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 CREMQ03060 361 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 POU4F3Q15319 338 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 OR10H5Q8NGA6 315 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 SUSD6Q92537 303 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 CDKN2AIPNLQ96HQ2 116 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 C7orf34Q96L11 122 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 RPL10LQ96L21 214 aaKnown RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 PFDN5Q99471 154 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 C7orf50Q9BRJ6 194 aaKnown RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 SEZ6LQ9BYH1 1024 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLA2Q9H6Q3 261 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 NECTIN3Q9NQS3 549 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 FLRT1Q9NZU1 646 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 FARS2O95363 451 aaKnown RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 MYF6P23409 242 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 PLA2G16P53816 162 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLC10A2Q12908 348 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 ODF4Q2M2E3 257 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 USP41Q3LFD5 358 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 SSX6Q7RTT6 188 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 KBTBD6Q86V97 674 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 GPALPP1Q8IXQ4 340 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 CASTOR1Q8WTX7 329 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms