RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 BOKQ9UMX3 212 aaPredicted RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 NPIPA1Q9UND3 350 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 PCDHGB2Q9Y5G2 931 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 ARAP2Q8WZ64 1704 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 ZBTB42B2RXF5 422 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 MANBAO00462 879 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 PRAMEF2O60811 474 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 SEC24DO94855 1032 aaPredicted RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 MYL9P24844 172 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 SLC18A1P54219 525 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 CDK3Q00526 305 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 SEC23BQ15437 767 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 TREML1Q86YW5 311 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 C8orf59Q8N0T1 100 aaPredicted RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 DHRSXQ8N5I4 330 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 TOR1AIP2Q8NFQ8 470 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 FBXL8Q96CD0 374 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 LOXL4Q96JB6 756 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 ZNF578Q96N58 590 aaPredicted RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 ZCCHC3Q9NUD5 404 aaKnown RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 RCBTB2O95199 551 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 F3P13726 295 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 MAGEA8P43361 318 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 DSTNP60981 165 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 HSF2Q03933 536 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 ZNF763Q0D2J5 394 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 TUBB3Q13509 450 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 CCDC142Q17RM4 750 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 FAM109BQ6ICB4 259 aaPredicted RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 TSACCQ96A04 125 aaPredicted RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 MYH7P12883 1935 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 PEX1O43933 1283 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 OR4F21O95013 312 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 TCN2P20062 427 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 SLC6A8P48029 635 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 TAS2R39P59534 338 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 PLCXD2Q0VAA5 305 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 HSPB3Q12988 150 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 PAQR3Q6TCH7 311 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 EID2Q8N6I1 236 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 ARL5BQ96KC2 179 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 AMDHD1Q96NU7 426 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 C19orf43Q9BQ61 176 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 TPD52L2O43399 206 aaKnown RBP12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 PLIN3O60664 434 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 CPNE3O75131 537 aaKnown RBP12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 CCDC159P0C7I6 412 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 ATF6P18850 670 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 ATP4BP51164 291 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 ATXN1P54253 815 aaKnown RBP12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 EMP2P54851 167 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 NXPE4Q6UWF7 544 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 PAQR7Q86WK9 346 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 CDX2Q99626 313 aaPredicted RBP12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 KATNBL1Q9H079 304 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 R3HDMLQ9H3Y0 253 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 ADAP2Q9NPF8 381 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 BAZ2AQ9UIF9 1905 aaKnown RBP12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 XIRP1Q702N8 1843 aaKnown RBP12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 PNMA8CA0A1B0GUJ8 204 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 TMEM221A6NGB7 291 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 M0R296 226 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 ASGR2P07307 311 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 CRTC1Q6UUV9 634 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 THAP5Q7Z6K1 395 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 OR4C6Q8NH72 309 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 NXPE2Q96DL1 559 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 PDP2Q9P2J9 529 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 ERGIC3Q9Y282 383 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 MBTPS2O43462 519 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 IL1R2P27930 398 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 OTX2P32243 289 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 USP46P62068 366 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 IRF4Q15306 451 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 EML3Q32P44 896 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 LRRC73Q5JTD7 316 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 AADACL2Q6P093 401 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 ZNF572Q7Z3I7 529 aaPredicted RBP12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 LRRTM3Q86VH5 581 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 GALNT12Q8IXK2 581 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 FBXL6Q8N531 539 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 RNASE11Q8TAA1 199 aaKnown RBP12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 ACTR10Q9NZ32 417 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 CPNE7Q9UBL6 633 aa12.98□□□□□ -0.33
PRPF38A-201ENST00000257181 MTHFD1P11586 935 aaKnown RBP12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 UQCRC2P22695 453 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 UCNP55089 124 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 OLR1P78380 273 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 SLC51AQ86UW1 340 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 ZC3HC1Q86WB0 502 aaKnown RBP12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 HS6ST2Q96MM7 605 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 COMMD4Q9H0A8 199 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 LINC00597Q9H2U6 94 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 SLAMF7Q9NQ25 335 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 LRIT1Q9P2V4 623 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 A0A1W2PRG6 482 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 NIPSNAP2O75323 286 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 TACSTD2P09758 323 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 ALOX12P18054 663 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms