RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 MVKQ03426 396 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 TBC1D25Q3MII6 688 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 CNDP2Q96KP4 475 aaKnown RBP18.4■□□□□ 0.54
PTPRE-201ENST00000254667 EBF2Q9HAK2 575 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 STC2O76061 302 aa18.39■□□□□ 0.54
PTPRE-201ENST00000254667 MRPL10Q7Z7H8 261 aaKnown RBP18.39■□□□□ 0.54
PTPRE-201ENST00000254667 TICAM1Q8IUC6 712 aa18.39■□□□□ 0.54
PTPRE-201ENST00000254667 IGDCC3Q8IVU1 814 aa18.39■□□□□ 0.54
PTPRE-201ENST00000254667 GORASP1Q9BQQ3 440 aa18.39■□□□□ 0.54
PTPRE-201ENST00000254667 OR51B5Q9H339 312 aa18.39■□□□□ 0.54
PTPRE-201ENST00000254667 PAK6Q9NQU5 681 aaPredicted RBP18.39■□□□□ 0.54
PTPRE-201ENST00000254667 NKIRAS2Q9NYR9 191 aa18.39■□□□□ 0.54
PTPRE-201ENST00000254667 OAZ3Q9UMX2 235 aa18.39■□□□□ 0.54
PTPRE-201ENST00000254667 PSAT1Q9Y617 370 aa18.39■□□□□ 0.54
PTPRE-201ENST00000254667 SPIN1Q9Y657 262 aaPredicted RBP18.39■□□□□ 0.54
PTPRE-201ENST00000254667 CAPN5O15484 640 aaPredicted RBP18.39■□□□□ 0.53
PTPRE-201ENST00000254667 ACRV1P26436 265 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 CLDN10P78369 228 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 PITPNAQ00169 270 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 C1orf220Q5T0J3 134 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 TMBIM1Q969X1 311 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 FIZ1Q96SL8 496 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 MS4A12Q9NXJ0 267 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 EME2A4GXA9 379 aaPredicted RBP18.39■□□□□ 0.53
PTPRE-201ENST00000254667 OR5K4A6NMS3 321 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 HOXA11P31270 313 aaPredicted RBP18.39■□□□□ 0.53
PTPRE-201ENST00000254667 PREPP48147 710 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 C7orf57Q8NEG2 295 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 MAPK15Q8TD08 544 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 ANKRA2Q9H9E1 313 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 MKS1Q9NXB0 559 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 GMEB2Q9UKD1 530 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 OARD1Q9Y530 152 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 M0QX08 132 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 MAFKO60675 156 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 CPNE3O75131 537 aaKnown RBP18.39■□□□□ 0.53
PTPRE-201ENST00000254667 GSCP56915 257 aaPredicted RBP18.39■□□□□ 0.53
PTPRE-201ENST00000254667 ELAVL3Q14576 367 aaKnown RBP18.39■□□□□ 0.53
PTPRE-201ENST00000254667 ELOCQ15369 112 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 DPY19L3Q6ZPD9 716 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 QSOX2Q6ZRP7 698 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 C12orf40Q86WS4 652 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 SLC22A15Q8IZD6 547 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 NFKBIDQ8NI38 313 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 PTTG2Q9NZH5 202 aa18.39■□□□□ 0.53
PTPRE-201ENST00000254667 CREG1O75629 220 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 HSD3B1P14060 373 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 HSD3B2P26439 372 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 RHDQ02161 417 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 MAPK14Q16539 360 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 SPANXN4Q5MJ08 99 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 MYH2Q9UKX2 1941 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 GATBO75879 557 aaKnown RBP18.38■□□□□ 0.53
PTPRE-201ENST00000254667 GSTT2BP0CG30 244 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 PFKLP17858 780 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 CSTF2P33240 577 aaKnown RBP eCLIP18.38■□□□□ 0.53
PTPRE-201ENST00000254667 PHF19Q5T6S3 580 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 C17orf99Q6UX52 265 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 GPRIN1Q7Z2K8 1008 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 UCK2Q9BZX2 261 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 NPC1O15118 1278 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 RFPL1O75677 317 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 GRIA2P42262 883 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 ARCN1P48444 511 aaKnown RBP18.38■□□□□ 0.53
PTPRE-201ENST00000254667 RAB8AP61006 207 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 OR52E4Q8NGH9 312 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 SMARCD2Q92925 531 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 TP53INP1Q96A56 240 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 KDM3BQ7LBC6 1761 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 VIRMAQ69YN4 1812 aaKnown RBP18.38■□□□□ 0.53
PTPRE-201ENST00000254667 OC90Q02509 493 aaPredicted RBP18.38■□□□□ 0.53
PTPRE-201ENST00000254667 PRPF38BQ5VTL8 546 aaKnown RBP18.38■□□□□ 0.53
PTPRE-201ENST00000254667 SMPDL3BQ92485 455 aa18.38■□□□□ 0.53
PTPRE-201ENST00000254667 A8MUA0 341 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 C2orf74A8MZ97 194 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 BTN3A3O00478 584 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 TYROBPO43914 113 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 KLF8O95600 359 aaPredicted RBP18.37■□□□□ 0.53
PTPRE-201ENST00000254667 CD1DP15813 335 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 RORCP51449 518 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 CREB5Q02930 508 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 PUM1Q14671 1186 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTPRE-201ENST00000254667 TIGD6Q17RP2 521 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 ANO7Q6IWH7 933 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 SLC39A5Q6ZMH5 540 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 GRHL3Q8TE85 626 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 SLC25A36Q96CQ1 311 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 REEP4Q9H6H4 257 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 GNB5O14775 395 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 PTPRCAPQ14761 206 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 FBXO43Q4G163 708 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 PRRT3Q5FWE3 981 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 NCSTNQ92542 709 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 WDR92Q96MX6 357 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 PDLIM7Q9NR12 457 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 H0YGN5 161 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 ITGA10O75578 1167 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 OPN1SWP03999 348 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 RAB33AQ14088 237 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 CRYGNQ8WXF5 182 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms