RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CD320Q9NPF0 282 aa15.21■□□□□ 0.02
LRFN1-201ENST00000248668 MAN2B2Q9Y2E5 1009 aa15.21■□□□□ 0.02
LRFN1-201ENST00000248668 TMED5Q9Y3A6 229 aa15.21■□□□□ 0.02
LRFN1-201ENST00000248668 KCNE2Q9Y6J6 123 aa15.21■□□□□ 0.02
LRFN1-201ENST00000248668 DOCK9Q9BZ29 2069 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 MGAT4DA6NG13 374 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 GABRR3A8MPY1 467 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 ZNF197O14709 1029 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 C1orf105O95561 183 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 EN2P19622 333 aaPredicted RBP15.2■□□□□ 0.02
LRFN1-201ENST00000248668 ESRRGP62508 458 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 MC1RQ01726 317 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 KCNAB2Q13303 367 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 SLBPQ14493 270 aaKnown RBP eCLIP15.2■□□□□ 0.02
LRFN1-201ENST00000248668 ZNF234Q14588 700 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 MEP1AQ16819 746 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 GPR107Q5VW38 600 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 KCTD8Q6ZWB6 473 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 NEK10Q6ZWH5 1172 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 ZDHHC21Q8IVQ6 265 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 ATL1Q8WXF7 558 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 DHRS1Q96LJ7 313 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 ARPC5LQ9BPX5 153 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 NDEL1Q9GZM8 345 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 NAA50Q9GZZ1 169 aaKnown RBP15.2■□□□□ 0.02
LRFN1-201ENST00000248668 FBXO10Q9UK96 956 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 CXorf51AA0A1B0GTR3 108 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 HTR3EA5X5Y0 456 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 PRR23AA6NEV1 266 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 POP7O75817 140 aaKnown RBP15.2■□□□□ 0.02
LRFN1-201ENST00000248668 MYO1DO94832 1006 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 PRNPP04156 253 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 PORP16435 677 aaPredicted RBP15.2■□□□□ 0.02
LRFN1-201ENST00000248668 NRIP1P48552 1158 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 RAE1P78406 368 aaKnown RBP15.2■□□□□ 0.02
LRFN1-201ENST00000248668 OR8D1Q8WZ84 308 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 DUSP26Q9BV47 211 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 TMEM106CQ9BVX2 250 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 TMEM121BQ9BXQ6 578 aaPredicted RBP15.2■□□□□ 0.02
LRFN1-201ENST00000248668 TM7SF3Q9NS93 570 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 WBP1LQ9NX94 342 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 DKK3Q9UBP4 350 aa15.2■□□□□ 0.02
LRFN1-201ENST00000248668 HNRNPA1P09651 372 aaKnown RBP eCLIP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 ADRB3P13945 408 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 ZNF8P17098 575 aaPredicted RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 DCTP40126 519 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 ABHD18Q0P651 414 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 GRHL2Q6ISB3 625 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 PDE12Q6L8Q7 609 aaKnown RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 C16orf87Q6PH81 154 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 ZNF547Q8IVP9 402 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 CLIP3Q96DZ5 547 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 PYURFQ96I23 114 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 REXO5Q96IC2 774 aaKnown RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 COQ10AQ96MF6 247 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 SORBS1Q9BX66 1292 aaKnown RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 OSBPL6Q9BZF3 934 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 DYRK4Q9NR20 520 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 SPATA6Q9NWH7 488 aaPredicted RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 RUVBL1Q9Y265 456 aaKnown RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 PCDHGA8Q9Y5G5 932 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 PRSS23O95084 383 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 BMP10O95393 424 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 EPHX1P07099 455 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 SRPRAP08240 638 aaKnown RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 CD300CQ08708 224 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 TTC23LQ6PF05 361 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 FAM83HQ6ZRV2 1179 aaPredicted RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 USP51Q70EK9 711 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 SLC7A5P1Q8MH63 180 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 EID3Q8N140 333 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 SP7Q8TDD2 431 aaPredicted RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 VPS35Q96QK1 796 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 NPLQ9BXD5 320 aaPredicted RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 IGFLR1Q9H665 355 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 RAPGEFL1Q9UHV5 662 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 SCN2BO60939 215 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 AGXTP21549 392 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 CSTF3Q12996 717 aaKnown RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 HNRNPA1L2Q32P51 320 aaKnown RBP15.19■□□□□ 0.02
LRFN1-201ENST00000248668 CPTPQ5TA50 214 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 MBOAT4Q96T53 435 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 FAM118AQ9NWS6 357 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 PCM1Q15154 2024 aa15.19■□□□□ 0.02
LRFN1-201ENST00000248668 SCAMP1O15126 338 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 PCDH7O60245 1069 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 HOXB9P17482 250 aaPredicted RBP15.18■□□□□ 0.02
LRFN1-201ENST00000248668 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
LRFN1-201ENST00000248668 TUBA4AP68366 448 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 GAB1Q13480 694 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.18■□□□□ 0.02
LRFN1-201ENST00000248668 SLCO4C1Q6ZQN7 724 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 TMEM26Q6ZUK4 368 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 ADHFE1Q8IWW8 467 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 NPAS3Q8IXF0 933 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 OR56A3Q8NH54 315 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 FGF13Q92913 245 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 ARMC5Q96C12 935 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 TPT1P8Q9HAU6 139 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 ACSL6Q9UKU0 697 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms