RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 MC1RQ01726 317 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 MEF2AQ02078 507 aaPredicted RBP24.65■■□□□ 1.54
RAB40C-201ENST00000248139 COX20Q5RI15 118 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 CATSPEREQ5SY80 951 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 EIF3MQ7L2H7 374 aaKnown RBP24.65■■□□□ 1.54
RAB40C-201ENST00000248139 ADIPOR2Q86V24 386 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 DUSP21Q9H596 190 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 RUBCNLQ9H714 662 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 SPATA6Q9NWH7 488 aaPredicted RBP24.65■■□□□ 1.54
RAB40C-201ENST00000248139 RPS6KA6Q9UK32 745 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 PCDHB11Q9Y5F2 797 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 FUOMA2VDF0 154 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 CTSLP07711 333 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 TYRP14679 529 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 RPS13P62277 151 aaKnown RBP24.64■■□□□ 1.54
RAB40C-201ENST00000248139 MVKQ03426 396 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 OCA2Q04671 838 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 CLCA4Q14CN2 919 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 ZNF385BQ569K4 471 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 CPTPQ5TA50 214 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 PKP4Q99569 1192 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 ACSL6Q9UKU0 697 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 ERGIC3Q9Y282 383 aa24.64■■□□□ 1.54
RAB40C-201ENST00000248139 RFPL2O75678 378 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 IMPA1P29218 277 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 RRM2P31350 389 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 MAD2L1BPQ15013 274 aaPredicted RBP24.64■■□□□ 1.53
RAB40C-201ENST00000248139 LIPJQ5W064 366 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 TMPRSS11BQ86T26 416 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 METTL3Q86U44 580 aaKnown RBP24.64■■□□□ 1.53
RAB40C-201ENST00000248139 FAM9CQ8IZT9 166 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 OR7G3Q8NG95 312 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 OR8J2Q8NGG1 315 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 SPPL2AQ8TCT8 520 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 NEIL2Q969S2 332 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 NDRG4Q9ULP0 352 aaKnown RBP24.64■■□□□ 1.53
RAB40C-201ENST00000248139 ZNF510Q9Y2H8 683 aa24.64■■□□□ 1.53
RAB40C-201ENST00000248139 SCAMP2O15127 329 aaKnown RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 GCM2O75603 506 aaPredicted RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 SULT1C4O75897 302 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 NADKO95544 446 aaPredicted RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 RECQLP46063 649 aaPredicted RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 METAP1P53582 386 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 CD300CQ08708 224 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 IQCCQ4KMZ1 466 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 SETD9Q8NE22 299 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 ZNF296Q8WUU4 475 aaPredicted RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 TMEM159Q96B96 161 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 RUVBL1Q9Y265 456 aaKnown RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 PMF1-BGLAPU3KQ54 211 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 TMEM229AB2RXF0 380 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 EIF3FO00303 357 aaPredicted RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 WBP4O75554 376 aaKnown RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 SLCO2B1O94956 709 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 IL18R1Q13478 541 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 GRIN2CQ14957 1233 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 SYT16Q17RD7 645 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 PAGE2BQ5JRK9 111 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 TSEN54Q7Z6J9 526 aaKnown RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 CLP1Q92989 425 aaKnown RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 C7orf34Q96L11 122 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 WRAP53Q9BUR4 548 aaKnown RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 ASPSCR1Q9BZE9 553 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 GABARAPL1Q9H0R8 117 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP24.63■■□□□ 1.532e-6■■■□□ 15.6
RAB40C-201ENST00000248139 EXO1Q9UQ84 846 aaKnown RBP24.63■■□□□ 1.53
RAB40C-201ENST00000248139 ATP11BQ9Y2G3 1177 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 TPRKBQ9Y3C4 175 aa24.63■■□□□ 1.53
RAB40C-201ENST00000248139 DENND4CQ5VZ89 1909 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 M0R129 80 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 M0R3G1 203 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 GSTM1P09488 218 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 ACRP10323 421 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 CTSAP10619 480 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 ETFAP13804 333 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 TIMP2P16035 220 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 CRATP43155 626 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 KCNJ10P78508 379 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 GSTM4Q03013 218 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 SP140Q13342 867 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 RGS21Q2M5E4 152 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 LY6G5CQ5SRR4 150 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 GPR155Q7Z3F1 870 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 SYNPOQ8N3V7 929 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 ZNF566Q969W8 418 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 FCRL1Q96LA6 429 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 RLIMQ9NVW2 624 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 SCN3BQ9NY72 215 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 TRIM17Q9Y577 477 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 M0QX08 132 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 LILRB3O75022 631 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 ZNF12P17014 697 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 POLR2LP62875 67 aaKnown RBP24.62■■□□□ 1.53
RAB40C-201ENST00000248139 IFITM3Q01628 133 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 NPRL3Q12980 569 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 CSTF3Q12996 717 aaKnown RBP24.62■■□□□ 1.53
RAB40C-201ENST00000248139 KIAA1614Q5VZ46 1190 aa24.62■■□□□ 1.53
RAB40C-201ENST00000248139 C2orf73Q8N5S3 287 aaPredicted RBP24.62■■□□□ 1.53
RAB40C-201ENST00000248139 ST13P5Q8NFI4 369 aaPredicted RBP24.62■■□□□ 1.53
RAB40C-201ENST00000248139 OR5AK3PQ8NH89 298 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms