RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 NUP210Q8TEM1 1887 aaPredicted RBP21.15■□□□□ 0.98
RNF39-201ENST00000244360 EVPLLA8MZ36 301 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 C5orf67F2Z3F1 127 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 FPGTO14772 594 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 NOBOXO60393 691 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 ITGAMP11215 1152 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 GPX2P18283 190 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 ITGB7P26010 798 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 PIGAP37287 484 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 METAP1P53582 386 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 LAPTM5Q13571 262 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 MEP1AQ16819 746 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 CES5AQ6NT32 575 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 CHPFQ8IZ52 775 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 BADQ92934 168 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 NXPE3Q969Y0 559 aa21.15■□□□□ 0.98
RNF39-201ENST00000244360 LINC01553A4QN01 128 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 CLIC1O00299 241 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 COX7A2P14406 83 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 PNLIPRP1P54315 467 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 ISL1P61371 349 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 RAE1P78406 368 aaKnown RBP21.14■□□□□ 0.98
RNF39-201ENST00000244360 CTU2Q2VPK5 515 aaKnown RBP21.14■□□□□ 0.98
RNF39-201ENST00000244360 SLCO4C1Q6ZQN7 724 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 CAMKMTQ7Z624 323 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 ARL10Q8N8L6 244 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 SETD9Q8NE22 299 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 TMIEQ8NEW7 156 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 OR7G3Q8NG95 312 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 PANX1Q96RD7 426 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 BAG5Q9UL15 447 aa21.14■□□□□ 0.98
RNF39-201ENST00000244360 SAMD4AQ9UPU9 718 aaKnown RBP21.14■□□□□ 0.98
RNF39-201ENST00000244360 MUC22E2RYF6 1773 aaPredicted RBP21.14■□□□□ 0.97
RNF39-201ENST00000244360 KIAA0100Q14667 2235 aaKnown RBP21.14■□□□□ 0.97
RNF39-201ENST00000244360 H3BM21 787 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 SLC1A7O00341 560 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 MYO1DO94832 1006 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 C1orf105O95561 183 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 ETHE1O95571 254 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 MESP2Q0VG99 397 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 DDX39BQ13838 428 aaKnown RBP21.14■□□□□ 0.97
RNF39-201ENST00000244360 CPZQ66K79 652 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 DCDC5Q6ZRR9 648 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 SPRED2Q7Z698 418 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 ZZZ3Q8IYH5 903 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 CHPT1Q8WUD6 406 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 FBLIM1Q8WUP2 373 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 ARRDC3Q96B67 414 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 NODALQ96S42 347 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 ZCCHC2Q9C0B9 1178 aaKnown RBP21.14■□□□□ 0.97
RNF39-201ENST00000244360 GABARAPL1Q9H0R8 117 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 AASDHPPTQ9NRN7 309 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 WARS2Q9UGM6 360 aaKnown RBP21.14■□□□□ 0.97
RNF39-201ENST00000244360 ENPP5Q9UJA9 477 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 ERVK-11Q9UQG0 969 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 SH3GLB1Q9Y371 365 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 MYO7AQ13402 2215 aa21.14■□□□□ 0.97
RNF39-201ENST00000244360 MAGEB17A8MXT2 336 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 PRRT4C9JH25 899 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 SCAMP2O15127 329 aaKnown RBP21.13■□□□□ 0.97
RNF39-201ENST00000244360 EPN2O95208 641 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 HTR1AP08908 422 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 OCM2P0CE71 109 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 OCMP0CE72 109 aaPredicted RBP21.13■□□□□ 0.97
RNF39-201ENST00000244360 ENGP17813 658 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 ASMTP46597 345 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 VAC14Q08AM6 782 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 ERICH5Q6P6B1 374 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 LINC00299Q6ZSB3 139 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 ANKRD13BQ86YJ7 626 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 HS3ST5Q8IZT8 346 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 PHOSPHO2Q8TCD6 241 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 CHTF18Q8WVB6 975 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 FKBP10Q96AY3 582 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 WDR34Q96EX3 536 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 TRIT1Q9H3H1 467 aaKnown RBP21.13■□□□□ 0.97
RNF39-201ENST00000244360 MAPRE3Q9UPY8 281 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 PCDHGB1Q9Y5G3 927 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 YY2O15391 372 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 KCNK5O95279 499 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 PBLDP30039 288 aaPredicted RBP21.13■□□□□ 0.97
RNF39-201ENST00000244360 CD97P48960 835 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 CCR3P51677 355 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 MAPK10P53779 464 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 ELP6Q0PNE2 266 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 VMACQ2NL98 169 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 HNRNPA1L2Q32P51 320 aaKnown RBP21.13■□□□□ 0.97
RNF39-201ENST00000244360 C9orf64Q5T6V5 341 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 GALNT18Q6P9A2 607 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 PSRC1Q6PGN9 363 aaPredicted RBP21.13■□□□□ 0.97
RNF39-201ENST00000244360 SHQ1Q6PI26 577 aaKnown RBP21.13■□□□□ 0.97
RNF39-201ENST00000244360 TMEM179BQ7Z7N9 219 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 RBM23Q86U06 439 aaKnown RBP21.13■□□□□ 0.97
RNF39-201ENST00000244360 DCP2Q8IU60 420 aaKnown RBP21.13■□□□□ 0.97
RNF39-201ENST00000244360 ZNF480Q8WV37 535 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 FUNDC2Q9BWH2 189 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 TDRKHQ9Y2W6 561 aaKnown RBP21.13■□□□□ 0.97
RNF39-201ENST00000244360 COQ6Q9Y2Z9 468 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 KCNE2Q9Y6J6 123 aa21.13■□□□□ 0.97
RNF39-201ENST00000244360 HSPE1-MOB4S4R3N1 261 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms