RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 NETO2Q8NC67 525 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 SLC2A14Q8TDB8 520 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 WNT8BQ93098 351 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 RADILQ96JH8 1075 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 SEC22CQ9BRL7 303 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 APOBEC3GQ9HC16 384 aaKnown RBP12.51□□□□□ -0.41
VAMP4-201ENST00000236192 GALNT9Q9HCQ5 603 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 C14orf105Q9NVL8 296 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 LYARQ9NX58 379 aaKnown RBP12.51□□□□□ -0.41
VAMP4-201ENST00000236192 PRAF2O60831 178 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 TPOP07202 933 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 CKMT1AP12532 417 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 CAPN3P20807 821 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 PTPN3P26045 913 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 CACNB2Q08289 660 aaPredicted RBP12.5□□□□□ -0.41
VAMP4-201ENST00000236192 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.5□□□□□ -0.41
VAMP4-201ENST00000236192 PIGZQ86VD9 579 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 BEND7Q8N7W2 519 aaPredicted RBP12.5□□□□□ -0.41
VAMP4-201ENST00000236192 ISL2Q96A47 359 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 ACO2Q99798 780 aaKnown RBP12.5□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF341Q9BYN7 854 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 MUC3BQ9H195 1237 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 TFB2MQ9H5Q4 396 aaKnown RBP12.5□□□□□ -0.41
VAMP4-201ENST00000236192 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 SLC23A1Q9UHI7 598 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 MAGEB17A8MXT2 336 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 ARPC5O15511 151 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 SPDEFO95238 335 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 ITGA3P26006 1051 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 HAAOP46952 286 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 DIO3P55073 304 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 EXOSC2Q13868 293 aaKnown RBP12.5□□□□□ -0.41
VAMP4-201ENST00000236192 GRB7Q14451 532 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 FCN2Q15485 313 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 SLC22A10Q63ZE4 541 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 YIPF6Q96EC8 236 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 PIWIL1Q96J94 861 aaKnown RBP12.5□□□□□ -0.41
VAMP4-201ENST00000236192 PCDHGB7Q9Y5F8 929 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 OR2A25A4D2G3 310 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 SDC3O75056 442 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 VARS2Q5ST30 1063 aaKnown RBP12.5□□□□□ -0.41
VAMP4-201ENST00000236192 C1orf189Q5VU69 101 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 TMEM81Q6P7N7 255 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 RPS27LQ71UM5 84 aaKnown RBP12.5□□□□□ -0.41
VAMP4-201ENST00000236192 TMEM151AQ8N4L1 468 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 ST6GAL2Q96JF0 529 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 FCRL1Q96LA6 429 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 OR6C65A6NJZ3 312 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 NTSR2O95665 410 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 STAG3L1P0CL83 205 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 CXCL8P10145 99 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 TXNP10599 105 aaKnown RBP12.5□□□□□ -0.41
VAMP4-201ENST00000236192 MAGEA11P43364 429 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 RAB13P51153 203 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 ADIGQ0VDE8 80 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 CHRNA6Q15825 494 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 TMEM44Q2T9K0 475 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 SV2CQ496J9 727 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 ATG9BQ674R7 924 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 SLC51AQ86UW1 340 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 FAM217AQ8IXS0 508 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 OR10Q1Q8NGQ4 319 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 C15orf40Q8WUR7 153 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 KLHL28Q9NXS3 571 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 PGAP2Q9UHJ9 254 aa12.5□□□□□ -0.41
VAMP4-201ENST00000236192 CRTAPO75718 401 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-201ENST00000236192 BAG6P46379 1132 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 VEGFCP49767 419 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 VSX2P58304 361 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-201ENST00000236192 ARF5P84085 180 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 SNTB2Q13425 540 aaKnown RBP12.49□□□□□ -0.41
VAMP4-201ENST00000236192 KIAA0930Q6ICG6 404 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-201ENST00000236192 LAX1Q8IWV1 398 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 GHDCQ8N2G8 530 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 SAMD12Q8N8I0 201 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 ARL11Q969Q4 196 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 ZFP42Q96MM3 310 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 FCRL3Q96P31 734 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-201ENST00000236192 TSSK3Q96PN8 268 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 BCAS3Q9H6U6 928 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 MIEF1Q9NQG6 463 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 CRLS1Q9UJA2 301 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 GSRP00390 522 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 TGM4P49221 684 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 XKP51811 444 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 METTL11BQ5VVY1 283 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 FAM171BQ6P995 826 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 METAP1DQ6UB28 335 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-201ENST00000236192 BAIAP2L2Q6UXY1 529 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 ANKS3Q6ZW76 656 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 VN1R5Q7Z5H4 357 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 DNAJC5GQ8N7S2 189 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 OR5T3Q8NGG3 340 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 TFAP2BQ92481 460 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 AIG1Q9NVV5 245 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 KIAA1522Q9P206 1035 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-201ENST00000236192 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 MYH11P35749 1972 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 LYPLA2O95372 231 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms