RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CARD17Q5XLA6 110 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 NCBP2-AS2Q69YL0 99 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 GOLGA7Q7Z5G4 137 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 BMP8AQ7Z5Y6 402 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 IL22RA1Q8N6P7 574 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 CCDC107Q8WV48 283 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 ZNF471Q9BX82 626 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 CLIC1O00299 241 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 KDELR3O43731 214 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 HMGN1P05114 100 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 ZNF30P17039 623 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 DPYSL2Q16555 572 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 DUOXA1Q1HG43 343 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 AAK1Q2M2I8 961 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 SUSD1Q6UWL2 747 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 ADGRD2Q7Z7M1 963 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 SMPDL3AQ92484 453 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 ERMAPQ96PL5 475 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 TMEM209Q96SK2 561 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 KCND1Q9NSA2 647 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 TNFRSF10DQ9UBN6 386 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 GPR34Q9UPC5 381 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 REXO2Q9Y3B8 237 aaKnown RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 IGLV3-22A0A075B6J6 115 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 FAM170BA6NMN3 283 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 ZNF99A8MXY4 864 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 NPIPA2E9PIF3 369 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 NPIPA3F8WFD2 350 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 RNF144AP50876 292 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 CCNHP51946 323 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 VSX2P58304 361 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 EIF2S3LQ2VIR3 472 aaKnown RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 SLC5A11Q8WWX8 675 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 FZD8Q9H461 694 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 IMPDH1P20839 514 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 MAD2L1BPQ15013 274 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 TIGD6Q17RP2 521 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 LRRC69Q6ZNQ3 347 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 MFSD2AQ8NA29 543 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 SCGB3A2Q96PL1 93 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 SLC5A7Q9GZV3 580 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 C14orf105Q9NVL8 296 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 EFCAB9A8MZ26 197 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 CBFA2T3O75081 653 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 CDC123O75794 336 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 H1F0P07305 194 aaKnown RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 DNAJA1P31689 397 aaKnown RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 CEACAM20Q6UY09 585 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 INO80EQ8NBZ0 244 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 A0A1B0GVI7 797 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 LAMTOR5O43504 91 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 ORC5O43913 435 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 FCER2P06734 321 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 PFKMP08237 780 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 FBLP22087 321 aaKnown RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 ITPRIPL2Q3MIP1 535 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 FRG2Q64ET8 278 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 PAMR1Q6UXH9 720 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 RAB11FIP2Q7L804 512 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 NATD1Q8N6N6 113 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 CEP76Q8TAP6 659 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 ZDHHC12Q96GR4 267 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 FRG2BQ96QU4 278 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 COQ10BQ9H8M1 238 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 RPL26L1Q9UNX3 145 aaKnown RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 FARSAQ9Y285 508 aaKnown RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 PCDHGB2Q9Y5G2 931 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 RCBTB2O95199 551 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 CPNE6O95741 557 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 CDH1P12830 882 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 PCSK2P16519 638 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 GADD45AP24522 165 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 LGI4Q8N135 537 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 OR8H3Q8N146 312 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 OR8D2Q9GZM6 311 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 ACTL8Q9H568 366 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 LAMP5Q9UJQ1 280 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 KCNS2Q9ULS6 477 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 KANTRA0A1W2PQU2 76 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 SOX1O00570 391 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 AHSA1O95433 338 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 DSG2Q14126 1118 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 ARL9Q6T311 187 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 TMCO2Q7Z6W1 182 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 MARCH9Q86YJ5 346 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 DNAJA3Q96EY1 480 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 IRF2BPLQ9H1B7 796 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 H3BUI4 141 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 DCDC1P59894 354 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 MRPL49Q13405 166 aaKnown RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 TRMT10BQ6PF06 316 aaKnown RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 THAP3Q8WTV1 239 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 TMEM121BQ9BXQ6 578 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-201ENST00000225964 SLC6A15Q9H2J7 730 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 ANKRA2Q9H9E1 313 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 ZNF446Q9NWS9 450 aa12.86□□□□□ -0.35
COL1A1-201ENST00000225964 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 GRID2O43424 1007 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms