RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 CPSF6Q16630 551 aaKnown RBP eCLIP18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 TMIGD1Q6UXZ0 262 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 GPRIN3Q6ZVF9 776 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 VN1R4Q7Z5H5 301 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 KRT78Q8N1N4 520 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 MFSD9Q8NBP5 474 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 CNDP1Q96KN2 507 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 SCNM1Q9BWG6 230 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 FANCEQ9HB96 536 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 TNFRSF12AQ9NP84 129 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 MID1IP1Q9NPA3 183 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 STARD5Q9NSY2 213 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 SLC39A1Q9NY26 324 aa18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 ZNF490Q9ULM2 529 aaPredicted RBP18.6■□□□□ 0.57
SNAPC2-201ENST00000221573 B4E171 279 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 H3BMH7 237 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 P2RX6O15547 441 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 SERPINE1P05121 402 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 EIF2S1P05198 315 aaKnown RBP18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 HNF4AP41235 474 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 TSPAN7P41732 249 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 CYP4F2P78329 520 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 CAMK2BQ13554 666 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 LAPTM5Q13571 262 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 PAGE2BQ5JRK9 111 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 MACROD1Q9BQ69 325 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 SPRTNQ9H040 489 aaPredicted RBP18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 DRC3Q9H069 523 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 FBXO8Q9NRD0 319 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 RARRES3Q9UL19 164 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 FFAR3O14843 346 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 POLR1CO15160 346 aaPredicted RBP18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 GPR42O15529 346 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 ITM2AO43736 263 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 LYPLA1O75608 230 aaPredicted RBP18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 TIAF1O95411 115 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 PKNOX1P55347 436 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 GABREP78334 506 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 HIST2H2ACQ16777 129 aaPredicted RBP18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 GGTA1PQ4G0N0 100 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 ARL13AQ5H913 290 aaPredicted RBP18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 PRAMEF17Q5VTA0 474 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 HIST2H2AA3Q6FI13 130 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 MED27Q6P2C8 311 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 TBC1D19Q8N5T2 526 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 CDYL2Q8N8U2 506 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 RERGQ96A58 199 aaPredicted RBP18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 ZNF285Q96NJ3 590 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 KCNA7Q96RP8 456 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 NT5DC2Q9H857 520 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 ZNF395Q9H8N7 513 aaPredicted RBP18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 INTS9Q9NV88 658 aaKnown RBP18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 IRAK4Q9NWZ3 460 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 TRPS1Q9UHF7 1281 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 STK38LQ9Y2H1 464 aa18.59■□□□□ 0.57
SNAPC2-201ENST00000221573 OR2B3O76000 313 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 ESRRBO95718 433 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 PCNAP12004 261 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 FGF5P12034 268 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 FOXA1P55317 472 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 ITGA1P56199 1179 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 ZRSR2Q15696 482 aaKnown RBP18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 HKDC1Q2TB90 917 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 TCHHL1Q5QJ38 904 aaPredicted RBP18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 WASHC2DQ5SRD0 308 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 VN1R5Q7Z5H4 357 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 CUZD1Q86UP6 607 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 PPP1R3BQ86XI6 285 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 LAS2Q8IYD9 372 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 RNF175Q8N4F7 328 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 OR7G3Q8NG95 312 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 THAP11Q96EK4 314 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 TRMOQ9BU70 441 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 C20orf27Q9GZN8 174 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 PITHD1Q9GZP4 211 aaPredicted RBP18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 POLR1BQ9H9Y6 1135 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 ZFP69BQ9UJL9 534 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 PCDHGA8Q9Y5G5 932 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 B3GALT1Q9Y5Z6 326 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 AP1M2Q9Y6Q5 423 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 FER1L5A0AVI2 2057 aa18.58■□□□□ 0.56
SNAPC2-201ENST00000221573 H0YIV9 168 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 SRPX2O60687 465 aaPredicted RBP18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 SERPIND1P05546 499 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 CAPN1P07384 714 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 ADRB1P08588 477 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 AHRP35869 848 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 BST1Q10588 318 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 IL11RAQ14626 422 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 PWWP2BQ6NUJ5 590 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 ASPGQ86U10 573 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 CSNK1A1LQ8N752 337 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 USP7Q93009 1102 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 TM4SF19Q96DZ7 209 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 TAAR9Q96RI9 348 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 SERTAD3Q9UJW9 196 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 SDK2Q58EX2 2172 aa18.57■□□□□ 0.56
SNAPC2-201ENST00000221573 SCN3AQ9NY46 2000 aa18.56■□□□□ 0.56
SNAPC2-201ENST00000221573 TMEM114B3SHH9 223 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms