RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 RETREG3Q86VR2 466 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 NRSN1Q8IZ57 195 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 RGL4Q8IZJ4 473 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 ZNF420Q8TAQ5 688 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 PMEPA1Q969W9 287 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 RIPOR3Q96MK2 946 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 SLC29A1Q99808 456 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 OSGEPL1Q9H4B0 414 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 C12orf49Q9H741 205 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 SMOXQ9NWM0 555 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 OBP2AQ9NY56 170 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 GPR45Q9Y5Y3 372 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 TSPAN11A1L157 253 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 AQP9O43315 295 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 FCARP24071 287 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 CDH15P55291 814 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 AP1S2P56377 157 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 OLR1P78380 273 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 MAD2L1Q13257 205 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 SGCGQ13326 291 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 PTGR1Q14914 329 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 TCEA2Q15560 299 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 ZC3H12BQ5HYM0 836 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 BLOC1S3Q6QNY0 202 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 FAM124AQ86V42 546 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 DHFR2Q86XF0 187 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 ZNF786Q8N393 782 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 LIX1Q8N485 282 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 OR14C36Q8NHC7 312 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 ADAMTS16Q8TE57 1224 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 NUDT8Q8WV74 236 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 ROPN1LQ96C74 230 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 INTS12Q96CB8 462 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 CXorf21Q9HAI6 301 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 EBF1Q9UH73 591 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 GPSM3Q9Y4H4 160 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 V9GYQ6 96 aa8.62□□□□□ -1.03
MTHFD1-201ENST00000216605 NUMA1Q14980 2115 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 TRAV6A0A075B6T7 132 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 PRORSD1PA6NEY8 169 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 A6NJY4 79 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 ARHGEF33A8MVX0 844 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 PSMD11O00231 422 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 NOL3O60936 208 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 GMNNO75496 209 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 LRATO95237 230 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 PAK4O96013 591 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 PDYNP01213 254 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 MAT2AP31153 395 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 DLX2Q07687 328 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 SMU1Q2TAY7 513 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 GAB4Q2WGN9 574 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 CCSMST1Q4G0I0 132 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 MTX3Q5HYI7 312 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 OGFOD2Q6N063 350 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 AGTRAPQ6RW13 159 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 LRRC70Q7Z2Q7 622 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 DTX3Q8N9I9 347 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 LMNTD1Q8N9Z9 388 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 TFAP2CQ92754 450 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 LRRC58Q96CX6 371 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 DUS3LQ96G46 650 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 PPM1MQ96MI6 270 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 TSSK3Q96PN8 268 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 MTERF1Q99551 399 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 HOPXQ9BPY8 73 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 TMEM245Q9H330 911 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 ARMC7Q9H6L4 198 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 THAP10Q9P2Z0 257 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 ASF1AQ9Y294 204 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 A0A1W2PP18 115 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 H0Y858 1186 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 SCAMP1O15126 338 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 AKAP10O43572 662 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 TPST1O60507 370 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 POU3F3P20264 500 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 MAPK1P28482 360 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 GRIA3P42263 894 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 P2RX3P56373 397 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 POLR2GP62487 172 aaKnown RBP eCLIP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 EMX2Q04743 252 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 CST6Q15828 149 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 PGS1Q32NB8 556 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 XKR7Q5GH72 579 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 NHSL2Q5HYW2 709 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 CLVS2Q5SYC1 327 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 THOC6Q86W42 341 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 PACRGLQ8N7B6 248 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 ANKFN1Q8N957 763 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 PLEKHA8Q96JA3 519 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 CEP19Q96LK0 163 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 APOLD1Q96LR9 279 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 CCDC138Q96M89 665 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 COQ10AQ96MF6 247 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 UHRF1Q96T88 793 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 THUMPD3Q9BV44 507 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 ACAT2Q9BWD1 397 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 SP140LQ9H930 580 aa8.61□□□□□ -1.03
MTHFD1-201ENST00000216605 C1orf109Q9NX04 203 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms