RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 KCNE1BA0A087WTH5 132 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 A0A1B0GTL3 188 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 SPAARA0A1B0GVQ0 90 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 TRBC2A0A5B9 178 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 H0YIV9 168 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 LCMT2O60294 686 aaKnown RBP11.81□□□□□ -0.52
LINC00339-213ENST00000642137 CHRNGP07510 517 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 EZRP15311 586 aaKnown RBP11.81□□□□□ -0.52
LINC00339-213ENST00000642137 CD22P20273 847 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 GSTM2P28161 218 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 ARRB2P32121 409 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 ARL1P40616 181 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-213ENST00000642137 ARL4DP49703 201 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 INHBCP55103 352 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 RPS15AP62244 130 aaKnown RBP11.81□□□□□ -0.52
LINC00339-213ENST00000642137 REEP5Q00765 189 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 GUCY1A3Q02108 690 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 SLBPQ14493 270 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00339-213ENST00000642137 CCDC157Q569K6 752 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 TMTC4Q5T4D3 741 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 LETMD1Q6P1Q0 360 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 MED27Q6P2C8 311 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 DHRS13Q6UX07 377 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 TMIGD1Q6UXZ0 262 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 LAS2Q8IYD9 372 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 SEC16BQ96JE7 1060 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 CCDC74BQ96LY2 380 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 CDK15Q96Q40 435 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 SORT1Q99523 831 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 KLHL25Q9H0H3 589 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 ZNF395Q9H8N7 513 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-213ENST00000642137 PSD3Q9NYI0 1048 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 ADGRE2Q9UHX3 823 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 ZDHHC2Q9UIJ5 367 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 PCDHGA11Q9Y5H2 935 aa11.81□□□□□ -0.52
LINC00339-213ENST00000642137 PTPRZ1P23471 2315 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-213ENST00000642137 COL27A1Q8IZC6 1860 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 MDC1Q14676 2089 aaKnown RBP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 FEZF1A0PJY2 475 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 SERTM1A2A2V5 107 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 HAT1O14929 419 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 HGSO14964 777 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 AZIN1O14977 448 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 OR1F1O43749 312 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 SRPX2O60687 465 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 PRAMEF10O60809 474 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 CTSVO60911 334 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 LYPLA1O75608 230 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 CAPN1P07384 714 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 MSL3P1P0C860 447 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 UROSP10746 265 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 AHRP35869 848 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 PLA2G5P39877 138 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 SCTRP47872 440 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 GABRA4P48169 554 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 SEPHS1P49903 392 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 RPL14P50914 215 aaKnown RBP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 OCRLQ01968 901 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 MEF2AQ02078 507 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 ZNF33BQ06732 778 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 RBBP5Q15291 538 aaKnown RBP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 ZRSR2Q15696 482 aaKnown RBP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 CPSF6Q16630 551 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 ISXQ2M1V0 245 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 TUBB8Q3ZCM7 444 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 C10orf62Q5T681 223 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-213ENST00000642137 PHF19Q5T6S3 580 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 RNF44Q7L0R7 432 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 MFSD9Q8NBP5 474 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 ZNF740Q8NDX6 193 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 TTLQ8NG68 377 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 METTL6Q8TCB7 284 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 REPS1Q96D71 796 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 C7orf26Q96N11 449 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 DEPDC7Q96QD5 511 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 OR2A5Q96R48 311 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 ZFYVE21Q9BQ24 234 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 SLC29A3Q9BZD2 475 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 SHCBP1LQ9BZQ2 653 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 SPNS1Q9H2V7 528 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 RHBGQ9H310 441 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 FAM60AQ9NP50 221 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 DLL3Q9NYJ7 618 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 SNX6Q9UNH7 406 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 PLCL2Q9UPR0 1127 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 TRAF6Q9Y4K3 522 aa11.8□□□□□ -0.52
LINC00339-213ENST00000642137 A0A0J9YVX5 310 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 ANKDD1BA6NHY2 528 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 POLR3GO15318 223 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-213ENST00000642137 KRT6AP02538 564 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 KRT6BP04259 564 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 HMOX2P30519 316 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 SERPINB1P30740 379 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00339-213ENST00000642137 PIK3CBP42338 1070 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 MLLT3P42568 568 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-213ENST00000642137 KRT6CP48668 564 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 PDX1P52945 283 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 ACY1Q03154 408 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 UGT3A2Q3SY77 523 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms