RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 CACHD1Q5VU97 1274 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 WDR74Q6RFH5 385 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-230ENST00000641927 SCIMPQ6UWF3 145 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 TMIGD1Q6UXZ0 262 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 FAM129CQ86XR2 697 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 TBC1D19Q8N5T2 526 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 OR4K1Q8NGD4 311 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 TWIST2Q8WVJ9 160 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 CCT6BQ92526 530 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 UBE2E3Q969T4 207 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 ZUFSPQ96AP4 578 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 REPS1Q96D71 796 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 GFM1Q96RP9 751 aaKnown RBP16.78■□□□□ 0.28
PHGDH-230ENST00000641927 HBEGFQ99075 208 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 CD180Q99467 661 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 PCDHGA11Q9Y5H2 935 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 DNAJC15Q9Y5T4 150 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 USH1CQ9Y6N9 552 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 ZFHX2Q9C0A1 2572 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-230ENST00000641927 SLCO1B7G3V0H7 640 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 TNFSF14O43557 240 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 ULK1O75385 1050 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 GP1BAP07359 652 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 DRD4P21917 467 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 REEP5Q00765 189 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 E2F2Q14209 437 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 FRG2Q64ET8 278 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 FCRL6Q6DN72 434 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 ZNF425Q6IV72 752 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 PAQR7Q86WK9 346 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 KIAA2013Q8IYS2 634 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 OR7G3Q8NG95 312 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 BAHD1Q8TBE0 780 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-230ENST00000641927 SELENOMQ8WWX9 145 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 FRG2BQ96QU4 278 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 NUF2Q9BZD4 464 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 FARSBQ9NSD9 589 aaKnown RBP16.77■□□□□ 0.28
PHGDH-230ENST00000641927 SOHLH2Q9NX45 425 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 VTI1BQ9UEU0 232 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 DCTN4Q9UJW0 460 aa16.77■□□□□ 0.28
PHGDH-230ENST00000641927 ZNF490Q9ULM2 529 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-230ENST00000641927 ASXL3Q9C0F0 2248 aa16.77■□□□□ 0.27
PHGDH-230ENST00000641927 H0YIV9 168 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 MANBAO00462 879 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 HDAC3O15379 428 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 MAP3K7O43318 606 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 PRAMEF10O60809 474 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 SNRNP200O75643 2136 aaKnown RBP16.76■□□□□ 0.27
PHGDH-230ENST00000641927 TGDSO95455 350 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 ARL4DP49703 201 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 ACADVLP49748 655 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 HTR6P50406 440 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 HK2P52789 917 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 CYP4F3Q08477 520 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 UGT3A2Q3SY77 523 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 ADNP2Q6IQ32 1131 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 TMEM71Q6P5X7 295 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 C19orf47Q8N9M1 422 aaKnown RBP16.76■□□□□ 0.27
PHGDH-230ENST00000641927 TRAPPC9Q96Q05 1148 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 MTERF1Q99551 399 aaKnown RBP16.76■□□□□ 0.27
PHGDH-230ENST00000641927 ELAC2Q9BQ52 826 aaKnown RBP16.76■□□□□ 0.27
PHGDH-230ENST00000641927 ANKMY1Q9P2S6 941 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 PTGDR2Q9Y5Y4 395 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 MN1Q10571 1320 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-230ENST00000641927 SPEGQ15772 3267 aa16.76■□□□□ 0.27
PHGDH-230ENST00000641927 IGHV5-51A0A0C4DH38 117 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 A0A0G2JND7 137 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 TRBC2A0A5B9 178 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 OR2A25A4D2G3 310 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 PIP5K1BO14986 540 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 DIAPH2O60879 1101 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 PDYNP01213 254 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 C9P02748 559 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 JUNP05412 331 aaKnown RBP16.75■□□□□ 0.27
PHGDH-230ENST00000641927 LINC00032P0C843 101 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 EZRP15311 586 aaKnown RBP16.75■□□□□ 0.27
PHGDH-230ENST00000641927 SEPHS1P49903 392 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 AQP5P55064 265 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 CYP4F2P78329 520 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 SPIDRQ14159 915 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 ABRAXAS2Q15018 415 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 VWA5B1Q5TIE3 1220 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 CGB2Q6NT52 195 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 RFWD2Q8NHY2 731 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 C19orf60Q96EN9 201 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 UNC13CQ8NB66 2214 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 A0A0J9YVX5 310 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 ANKDD1BA6NHY2 528 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 TRPC5OSA6NMA1 111 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 SRRM3A6NNA2 597 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-230ENST00000641927 LCMT2O60294 686 aaKnown RBP16.75■□□□□ 0.27
PHGDH-230ENST00000641927 GFRA3O60609 400 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 SERPIND1P05546 499 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 BCL6P41182 706 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 MLLT3P42568 568 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-230ENST00000641927 PHEXP78562 749 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 BTKQ06187 659 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 SQSTM1Q13501 440 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 ZIC1Q15915 447 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 TMPRSS9Q7Z410 1059 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms