RNA–Protein interactions for RNA: ENST00000641575.1

SCN1A-219, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 BASIC

Gene SCN1A, Length 12,874 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-219ENST00000641575 BHMG1C9JSJ3 638 aaPredicted RBP2.72□□□□□ -1.97
SCN1A-219ENST00000641575 ZNF185O15231 689 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 PROS1P07225 676 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 TPBGLP0DKB5 382 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 PHKG2P15735 406 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 DRD1P21728 446 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 PPIBP23284 216 aaKnown RBP2.72□□□□□ -1.97
SCN1A-219ENST00000641575 VAMP1P23763 118 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 AZGP1P25311 298 aaKnown RBP2.72□□□□□ -1.97
SCN1A-219ENST00000641575 GALCP54803 685 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 UGT2B15P54855 530 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 ACVR2BQ13705 512 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 SLC5A9Q2M3M2 681 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 CNPY1Q3B7I2 92 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 ZNF792Q3KQV3 632 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 PTPN20Q4JDL3 420 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 MPP7Q5T2T1 576 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 DCAF12Q5T6F0 453 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 ZNF746Q6NUN9 644 aaPredicted RBP2.72□□□□□ -1.97
SCN1A-219ENST00000641575 DPPA2Q7Z7J5 298 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 SKA3Q8IX90 412 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 C1orf87Q8N0U7 546 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 ZNF808Q8N4W9 903 aaPredicted RBP2.72□□□□□ -1.97
SCN1A-219ENST00000641575 POU5F2Q8N7G0 328 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 KDM1BQ8NB78 822 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 OR2L2Q8NH16 312 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 MAPK15Q8TD08 544 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 OXER1Q8TDS5 423 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 CREB3L1Q96BA8 519 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 FAM120BQ96EK7 910 aaKnown RBP2.72□□□□□ -1.97
SCN1A-219ENST00000641575 DUS3LQ96G46 650 aaKnown RBP2.72□□□□□ -1.97
SCN1A-219ENST00000641575 BTF3L4Q96K17 158 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 SLC23A2Q9UGH3 650 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 DKKL1Q9UK85 242 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 MED31Q9Y3C7 131 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 DOCK5Q9H7D0 1870 aa2.72□□□□□ -1.97
SCN1A-219ENST00000641575 DMBT1Q9UGM3 2413 aaPredicted RBP2.71□□□□□ -1.97
SCN1A-219ENST00000641575 A0A1W2PQC6 194 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 NPEPPSL1A6NEC2 478 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 MANBAO00462 879 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 GMDSO60547 372 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 P04436 131 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 H2AFB2P0C5Z0 115 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 HOXC9P31274 260 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 MAN2A2P49641 1150 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 MAPK12P53778 367 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 AIF1P55008 147 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 GCNT1Q02742 428 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 PKP1Q13835 747 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 PON2Q15165 354 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 NKG7Q16617 165 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 PLEKHG6Q3KR16 790 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 ERN2Q76MJ5 926 aaKnown RBP2.71□□□□□ -1.97
SCN1A-219ENST00000641575 PIM3Q86V86 326 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 PIGZQ86VD9 579 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 COMMD7Q86VX2 200 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 C17orf64Q86WR6 236 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 PPIL6Q8IXY8 311 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 PLD5Q8N7P1 536 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 EIF1ADQ8N9N8 165 aaKnown RBP2.71□□□□□ -1.97
SCN1A-219ENST00000641575 SIDT2Q8NBJ9 832 aaKnown RBP2.71□□□□□ -1.97
SCN1A-219ENST00000641575 CHDHQ8NE62 594 aaPredicted RBP2.71□□□□□ -1.97
SCN1A-219ENST00000641575 OR2L3Q8NG85 312 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 OR14C36Q8NHC7 312 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 PDLIM2Q96JY6 352 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 TARS2Q9BW92 718 aaKnown RBP2.71□□□□□ -1.97
SCN1A-219ENST00000641575 TMEM45AQ9NWC5 275 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 ARMCX1Q9P291 453 aa2.71□□□□□ -1.97
SCN1A-219ENST00000641575 LOC100509620A0A075B734 347 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 ANKRD61A6NGH8 418 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF705EA8MWA4 302 aaPredicted RBP2.71□□□□□ -1.98
SCN1A-219ENST00000641575 F5H6K3 240 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 HCN1O60741 890 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 GABBR2O75899 941 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 VNN2O95498 520 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 FADS2O95864 444 aaKnown RBP2.71□□□□□ -1.98
SCN1A-219ENST00000641575 RAC2P15153 192 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 MAGEA11P43364 429 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 NOMO3P69849 1222 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 HSD11B2P80365 405 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 TLE2Q04725 743 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 PRKCDQ05655 676 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 KLRC3Q07444 240 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 TNK2Q07912 1038 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 CAMK2BQ13554 666 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 DRAP1Q14919 205 aaPredicted RBP2.71□□□□□ -1.98
SCN1A-219ENST00000641575 PDK2Q15119 407 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 NOMO1Q15155 1222 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 KRBOX4Q5JUW0 171 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 PRPF38BQ5VTL8 546 aaKnown RBP2.71□□□□□ -1.98
SCN1A-219ENST00000641575 TMPRSS11AQ6ZMR5 421 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 CHST9Q7L1S5 443 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 HAPLN4Q86UW8 402 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 FAM83AQ86UY5 434 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 ZDHHC13Q8IUH4 622 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 RASGEF1CQ8N431 466 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 LRRC57Q8N9N7 239 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 ACTRT2Q8TDY3 377 aa2.71□□□□□ -1.98
SCN1A-219ENST00000641575 RCC1LQ96I51 464 aaKnown RBP2.71□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF512BQ96KM6 892 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms