RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 COPS4Q9BT78 406 aa16.01■□□□□ 0.15
HNRNPU-228ENST00000640306 VN1R3Q9BXE9 311 aa16.01■□□□□ 0.15
HNRNPU-228ENST00000640306 ROGDIQ9GZN7 287 aa16.01■□□□□ 0.15
HNRNPU-228ENST00000640306 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
HNRNPU-228ENST00000640306 AP3M1Q9Y2T2 418 aa16.01■□□□□ 0.15
HNRNPU-228ENST00000640306 OR2AG2A6NM03 316 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 DNAJB5O75953 348 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 HSMCR30P0CW71 290 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 GADD45AP24522 165 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 GTF2E2P29084 291 aaKnown RBP16■□□□□ 0.15
HNRNPU-228ENST00000640306 CD40LGP29965 261 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 ALDH7A1P49419 539 aaKnown RBP16■□□□□ 0.15
HNRNPU-228ENST00000640306 HKDC1Q2TB90 917 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 XKR6Q5GH73 641 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 SERPINA11Q86U17 422 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 TSPYL5Q86VY4 417 aaPredicted RBP16■□□□□ 0.15
HNRNPU-228ENST00000640306 SCAMP4Q969E2 229 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 RLIMQ9NVW2 624 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 FZD4Q9ULV1 537 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 FRMPD3Q5JV73 1810 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 OR2A25A4D2G3 310 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 PRRG1O14668 218 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 AIREO43918 545 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 MYO1DO94832 1006 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 CRYBA2P53672 197 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 CRISP3P54108 245 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 SMARCB1Q12824 385 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 ELAVL2Q12926 359 aaKnown RBP16■□□□□ 0.15
HNRNPU-228ENST00000640306 ABRQ12979 859 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 DDX59Q5T1V6 619 aaKnown RBP eCLIP16■□□□□ 0.15
HNRNPU-228ENST00000640306 SLC8B1Q6J4K2 584 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 SVOPQ8N4V2 548 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 ADAMTS19Q8TE59 1207 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 UTP15Q8TED0 518 aaKnown RBP16■□□□□ 0.15
HNRNPU-228ENST00000640306 SCLYQ96I15 445 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 STARD7Q9NQZ5 370 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 RAD18Q9NS91 495 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 ZDHHC3Q9NYG2 299 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 TAS2R16Q9NYV7 291 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 SCHIP1Q9P0W5 487 aaPredicted RBP16■□□□□ 0.15
HNRNPU-228ENST00000640306 RPS6KA6Q9UK32 745 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 RNF6Q9Y252 685 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 CAB39Q9Y376 341 aaPredicted RBP16■□□□□ 0.15
HNRNPU-228ENST00000640306 PCDHGA6Q9Y5G7 932 aa16■□□□□ 0.15
HNRNPU-228ENST00000640306 ZNF821O75541 412 aaPredicted RBP15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 NKX2-5P52952 324 aaPredicted RBP15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 CYP4F8P98187 520 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 PTSQ03393 145 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 LMAN2Q12907 356 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 LHX8Q68G74 356 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 DNAJB7Q7Z6W7 309 aaPredicted RBP15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 ZDHHC6Q9H6R6 413 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 FBXO8Q9NRD0 319 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 DNAJC11Q9NVH1 559 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 SH3BP4Q9P0V3 963 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 THSD7BQ9C0I4 1608 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 E7EQ34 232 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 SCN2BO60939 215 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 ETHE1O95571 254 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 DNTTP04053 509 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 GJA1P17302 382 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 PRPS1L1P21108 318 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 MAPK1P28482 360 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 GRK5P34947 590 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 SLC19A1P41440 591 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 TP53BP2Q13625 1128 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 GPR33Q49SQ1 333 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 CBLL1Q75N03 491 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 EIF3MQ7L2H7 374 aaKnown RBP15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 PRSS48Q7RTY5 328 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 FAM83FQ8NEG4 500 aaPredicted RBP15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 C2orf15Q8WU43 125 aaKnown RBP15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 FEVQ99581 238 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 GABARAPL1Q9H0R8 117 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 GPR83Q9NYM4 423 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 SLC6A14Q9UN76 642 aa15.99■□□□□ 0.15
HNRNPU-228ENST00000640306 TMEM202A6NGA9 273 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 CST5P28325 142 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 SERPINA4P29622 427 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 ACSM2AQ08AH3 577 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 GAB1Q13480 694 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 CCSMST1Q4G0I0 132 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 ACSM2BQ68CK6 577 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 TMCO2Q7Z6W1 182 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 TMEM150AQ86TG1 271 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 SYTL1Q8IYJ3 562 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 LILRA3Q8N6C8 439 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 POC5Q8NA72 575 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 ASB11Q8WXH4 323 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 SLC12A9Q9BXP2 914 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 TMEM121BQ9BXQ6 578 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 SMG9Q9H0W8 520 aaKnown RBP15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 ZNF334Q9HCZ1 680 aaPredicted RBP15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 TMPRSS11EQ9UL52 423 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 PCDH7O60245 1069 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 DLGAP3O95886 979 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 IGSF6O95976 241 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 OR56A5P0C7T3 313 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 IL1RNP18510 177 aa15.98■□□□□ 0.15
HNRNPU-228ENST00000640306 NKX3-2P78367 333 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms