RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ZPBPQ9BS86 351 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 CAPS2Q9BXY5 557 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 CCDC86Q9H6F5 360 aaKnown RBP12.63□□□□□ -0.39
GTF3A-209ENST00000640289 ZBTB26Q9HCK0 441 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 IRAK4Q9NWZ3 460 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 GEMIN8Q9NWZ8 242 aaKnown RBP12.63□□□□□ -0.39
GTF3A-209ENST00000640289 SERTAD3Q9UJW9 196 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 ANGPTL3Q9Y5C1 460 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 GOLGA6L10A6NI86 522 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 P2RX6O15547 441 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 ZNF749O43361 778 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 TLX3O43711 291 aaPredicted RBP12.62□□□□□ -0.39
GTF3A-209ENST00000640289 OR1F1O43749 312 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 STK17BO94768 372 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 CAPNS1P04632 268 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 CPA3P15088 417 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 TSPAN8P19075 237 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 CD22P20273 847 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 GRK3P35626 688 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 CDH13P55290 713 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 ERVPABLB-1P60509 514 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 RPS15AP62244 130 aaKnown RBP12.62□□□□□ -0.39
GTF3A-209ENST00000640289 IRF8Q02556 426 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 PCLAFQ15004 111 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 UNC50Q53HI1 259 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 WASHC2DQ5SRD0 308 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 ZNF678Q5SXM1 525 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 FAM219BQ5XKK7 198 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 VN1R4Q7Z5H5 301 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 BPHLQ86WA6 291 aaPredicted RBP12.62□□□□□ -0.39
GTF3A-209ENST00000640289 SLC22A9Q8IVM8 553 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 GPR135Q8IZ08 494 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 ZNF655Q8N720 491 aaPredicted RBP12.62□□□□□ -0.39
GTF3A-209ENST00000640289 SLC38A9Q8NBW4 561 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 OR8K5Q8NH50 307 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 ZNF483Q8TF39 744 aaPredicted RBP12.62□□□□□ -0.39
GTF3A-209ENST00000640289 ARL8AQ96BM9 186 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 ZNF285Q96NJ3 590 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 MACROD1Q9BQ69 325 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 C1QTNF3Q9BXJ4 246 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 ULBP3Q9BZM4 244 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 SPRY4Q9C004 299 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 B3GNT4Q9C0J1 378 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 NOL11Q9H8H0 719 aaKnown RBP12.62□□□□□ -0.39
GTF3A-209ENST00000640289 IPPKQ9H8X2 491 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 SEMA4BQ9NPR2 832 aaPredicted RBP12.62□□□□□ -0.39
GTF3A-209ENST00000640289 COPG2Q9UBF2 871 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 PCDHGA4Q9Y5G9 962 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 ACTL7BQ9Y614 415 aa12.62□□□□□ -0.39
GTF3A-209ENST00000640289 TRBC2A0A5B9 178 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 PPP6CO00743 305 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 OR7A17O14581 309 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 ZSCAN9O15535 394 aaPredicted RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 SRPX2O60687 465 aaPredicted RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 SUPT7LO94864 414 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 DLGAP3O95886 979 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 IMPDH1P20839 514 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 SCTRP47872 440 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 PRKAA2P54646 552 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 MAGOHP61326 146 aaKnown RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 HERVK_113P63132 956 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 SNRPNP63162 240 aaKnown RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 RELAQ04206 551 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 MPP2Q14168 576 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 RBBP5Q15291 538 aaKnown RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 HKDC1Q2TB90 917 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 METTL2BQ6P1Q9 378 aaKnown RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 TIPARPQ7Z3E1 657 aaKnown RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 C10orf107Q8IVU9 208 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 DTWD1Q8N5C7 304 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 CSNK1A1LQ8N752 337 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 ANKRD53Q8N9V6 530 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 MFSD9Q8NBP5 474 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 GALNT6Q8NCL4 622 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 OR52B6Q8NGF0 335 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 RDH11Q8TC12 318 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 TLCD1Q96CP7 247 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 WDR34Q96EX3 536 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 PTCD3Q96EY7 689 aaKnown RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 CDK15Q96Q40 435 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 AIF1LQ9BQI0 150 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 MECRQ9BV79 373 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 SARGQ9BW04 601 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 ERVK-6Q9BXR3 956 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 VIPAS39Q9H9C1 493 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 ACTR5Q9H9F9 607 aaPredicted RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 SSU72Q9NP77 194 aaKnown RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 KCNK9Q9NPC2 374 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 ZNF446Q9NWS9 450 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 DHCR7Q9UBM7 475 aaKnown RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 TMEM184BQ9Y519 407 aaPredicted RBP12.61□□□□□ -0.39
GTF3A-209ENST00000640289 PCDHB3Q9Y5E6 796 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 CACNA1AO00555 2505 aa12.61□□□□□ -0.39
GTF3A-209ENST00000640289 KCNE1BA0A087WTH5 132 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 A0A1B0GTL3 188 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 FITM1A5D6W6 292 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 CPNE3O75131 537 aaKnown RBP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 H2AFYO75367 372 aaKnown RBP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 KATNA1O75449 491 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 SNRNP200O75643 2136 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms