RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 SRPK3Q9UPE1 567 aa20.79■□□□□ 0.92
SCN1B-206ENST00000638536 ASB1Q9Y576 335 aa20.79■□□□□ 0.92
SCN1B-206ENST00000638536 PCSK5Q92824 1860 aa20.79■□□□□ 0.92
SCN1B-206ENST00000638536 EXOC1LA0A1B0GW35 172 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 HYKKA2RU49 373 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 TNFRSF8P28908 595 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 BCL6P41182 706 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 MAGEA12P43365 314 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 GLRBP48167 497 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 RELAQ04206 551 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 IL10RAQ13651 578 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 ARHGEF39Q8N4T4 335 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 EIF1ADQ8N9N8 165 aaKnown RBP20.78■□□□□ 0.92
SCN1B-206ENST00000638536 ABHD11Q8NFV4 315 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 HAUS8Q9BT25 410 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 NLNQ9BYT8 704 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 TLN1Q9Y490 2541 aaKnown RBP20.78■□□□□ 0.92
SCN1B-206ENST00000638536 SCN2AQ99250 2005 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 OR1D4P47884 311 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 HNMTP50135 292 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 SERPINB8P50452 374 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 VSNL1P62760 191 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 DCDP81605 110 aaKnown RBP20.78■□□□□ 0.92
SCN1B-206ENST00000638536 CDC20Q12834 499 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 LINC00303Q3SY05 128 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 MLIPQ5VWP3 458 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 CSNK1A1LQ8N752 337 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 OR4K1Q8NGD4 311 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 PROKR1Q8TCW9 393 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 ISL2Q96A47 359 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 GPR87Q9BY21 358 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 VPS11Q9H270 941 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 NMRAL1Q9HBL8 299 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 ZNF180Q9UJW8 692 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 RNF112Q9ULX5 631 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 MRPS2Q9Y399 296 aaKnown RBP20.78■□□□□ 0.92
SCN1B-206ENST00000638536 MAU2Q9Y6X3 613 aa20.78■□□□□ 0.92
SCN1B-206ENST00000638536 A0A087X1B8 175 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 A0A1B0GX78 115 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 TRIM49D1C9J1S8 452 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 UBXN8O00124 270 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 DSCR3O14972 297 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 SLU7O95391 586 aaKnown RBP20.77■□□□□ 0.92
SCN1B-206ENST00000638536 HSPA7P48741 367 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 ARSFP54793 590 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 RPS15P62841 145 aaKnown RBP20.77■□□□□ 0.92
SCN1B-206ENST00000638536 NCF4Q15080 339 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 TBR1Q16650 682 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 NKAIN1Q4KMZ8 207 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 COX15Q7KZN9 410 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 TTC29Q8NA56 475 aaPredicted RBP20.77■□□□□ 0.92
SCN1B-206ENST00000638536 STAG3L4Q8TBR4 150 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 SLC5A11Q8WWX8 675 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 DPH2Q9BQC3 489 aaPredicted RBP20.77■□□□□ 0.92
SCN1B-206ENST00000638536 CD274Q9NZQ7 290 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 PTBP2Q9UKA9 531 aaKnown RBP20.77■□□□□ 0.92
SCN1B-206ENST00000638536 TLK1Q9UKI8 766 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 TCFL5Q9UL49 500 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 IKBKGQ9Y6K9 419 aa20.77■□□□□ 0.92
SCN1B-206ENST00000638536 KLF7O75840 302 aaPredicted RBP20.76■□□□□ 0.91
SCN1B-206ENST00000638536 WDR47O94967 919 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 RAB40ALP0C0E4 278 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 MTHFD2P13995 350 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 AGXTP21549 392 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 HRH2P25021 359 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 GGT5P36269 586 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 SLC26A3P40879 764 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 SERPINB9P50453 376 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 ADGRD1Q6QNK2 874 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 KLHDC8AQ8IYD2 350 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 SHISA5Q8N114 240 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 PDPRQ8NCN5 879 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 WWOXQ9NZC7 414 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 CFAP46Q8IYW2 2715 aa20.76■□□□□ 0.91
SCN1B-206ENST00000638536 KCNE1BA0A087WTH5 132 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 PRAMEF4O60810 478 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 KLHL2O95198 593 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 SHBGP04278 402 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 VARSP26640 1264 aaKnown RBP20.75■□□□□ 0.91
SCN1B-206ENST00000638536 AGTR2P50052 363 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 CCR8P51685 355 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 RPS15AP62244 130 aaKnown RBP20.75■□□□□ 0.91
SCN1B-206ENST00000638536 RHDQ02161 417 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 FAM214AQ32MH5 1076 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 SOWAHCQ53LP3 525 aaPredicted RBP20.75■□□□□ 0.91
SCN1B-206ENST00000638536 PRAMEF9Q5VWM5 478 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 MRPL14Q6P1L8 145 aaKnown RBP20.75■□□□□ 0.91
SCN1B-206ENST00000638536 MOCOSQ96EN8 888 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 CABS1Q96KC9 395 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 IFT80Q9P2H3 777 aaPredicted RBP20.75■□□□□ 0.91
SCN1B-206ENST00000638536 CDC14CA4D256 554 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 KERAO60938 352 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 KRT38O76015 456 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 DEFB109BQ30KR1 87 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 TAF1BQ53T94 588 aaPredicted RBP20.75■□□□□ 0.91
SCN1B-206ENST00000638536 SULT1C3Q6IMI6 304 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 TMPRSS11BQ86T26 416 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 RERGQ96A58 199 aaPredicted RBP20.75■□□□□ 0.91
SCN1B-206ENST00000638536 TM4SF19Q96DZ7 209 aa20.75■□□□□ 0.91
SCN1B-206ENST00000638536 SPENQ96T58 3664 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 316.1 ms