RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 DYRK1BQ9Y463 629 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 PRKAB1Q9Y478 270 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 C2orf16Q68DN1 1984 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 C1QTNF3-AMACRE9PGA6 284 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 BMP10O95393 424 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 THRBP10828 461 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 VAC14Q08AM6 782 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 PDGFRLQ15198 375 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 TANGO2Q6ICL3 276 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 ZCCHC8Q6NZY4 707 aaKnown RBP20.75■□□□□ 0.91
CLN6-224ENST00000638076 HS3ST5Q8IZT8 346 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 STARD8Q92502 1023 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 SH3KBP1Q96B97 665 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 PYURFQ96I23 114 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 SGPP1Q9BX95 441 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 PRSS16Q9NQE7 514 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 AASDHPPTQ9NRN7 309 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 TUBA8Q9NY65 449 aaPredicted RBP20.75■□□□□ 0.91
CLN6-224ENST00000638076 PCYT1BQ9Y5K3 369 aaPredicted RBP20.75■□□□□ 0.91
CLN6-224ENST00000638076 CEPT1Q9Y6K0 416 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 A0A087WXM4 84 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 GABRR3A8MPY1 467 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 IL1RNP18510 177 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 FCARP24071 287 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 OPRD1P41143 372 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 ASMTP46597 345 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 CCR3P51677 355 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 TAP2Q03519 686 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 CNTN1Q12860 1018 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 SLBPQ14493 270 aaKnown RBP eCLIP20.75■□□□□ 0.91
CLN6-224ENST00000638076 RBBP5Q15291 538 aaKnown RBP20.75■□□□□ 0.91
CLN6-224ENST00000638076 CWF19L1Q69YN2 538 aaKnown RBP20.75■□□□□ 0.91
CLN6-224ENST00000638076 DSG4Q86SJ6 1040 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 REPS1Q96D71 796 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 DPEP2Q9H4A9 486 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 VCX3AQ9NNX9 186 aa20.75■□□□□ 0.91
CLN6-224ENST00000638076 GNG14A0A1W2PPG7 69 aa20.74■□□□□ 0.91
CLN6-224ENST00000638076 CCNDBP1O95273 360 aa20.74■□□□□ 0.91
CLN6-224ENST00000638076 HPRP00739 348 aa20.74■□□□□ 0.91
CLN6-224ENST00000638076 ERVK-21P61565 698 aa20.74■□□□□ 0.91
CLN6-224ENST00000638076 PPP1R8Q12972 351 aaKnown RBP20.74■□□□□ 0.91
CLN6-224ENST00000638076 CPTPQ5TA50 214 aa20.74■□□□□ 0.91
CLN6-224ENST00000638076 FKBP9P1Q75LS8 142 aa20.74■□□□□ 0.91
CLN6-224ENST00000638076 C11orf96Q7Z7L8 435 aa20.74■□□□□ 0.91
CLN6-224ENST00000638076 ADHFE1Q8IWW8 467 aa20.74■□□□□ 0.91
CLN6-224ENST00000638076 SMURF2Q9HAU4 748 aa20.74■□□□□ 0.91
CLN6-224ENST00000638076 ITM2CQ9NQX7 267 aa20.74■□□□□ 0.91
CLN6-224ENST00000638076 MGAT4DA6NG13 374 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 TRIM64A6NGJ6 449 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 VEGFDO43915 354 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 GPX2P18283 190 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 ACADLP28330 430 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 TIA1P31483 386 aaKnown RBP eCLIP20.73■□□□□ 0.911e-5■■■□□ 19.1
CLN6-224ENST00000638076 LSAMPQ13449 338 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 LRRC23Q53EV4 343 aaPredicted RBP20.73■□□□□ 0.91
CLN6-224ENST00000638076 SPESP1Q6UW49 350 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 VITQ6UXI7 678 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 FAM83HQ6ZRV2 1179 aaPredicted RBP20.73■□□□□ 0.91
CLN6-224ENST00000638076 LRRC56Q8IYG6 542 aaPredicted RBP20.73■□□□□ 0.91
CLN6-224ENST00000638076 ZCCHC7Q8N3Z6 543 aaKnown RBP20.73■□□□□ 0.91
CLN6-224ENST00000638076 SVOPLQ8N434 492 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 MUS81Q96NY9 551 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 ZDHHC5Q9C0B5 715 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 GDE1Q9NZC3 331 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 PTTG2Q9NZH5 202 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 HCN2Q9UL51 889 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 KCNK5O95279 499 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 C1GALT1C1LP0DN25 315 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 CDH2P19022 906 aaPredicted RBP20.73■□□□□ 0.91
CLN6-224ENST00000638076 PNLIPRP1P54315 467 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 C9orf50Q5SZB4 431 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 B3GNT6Q6ZMB0 384 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 PNPT1Q8TCS8 783 aaKnown RBP20.73■□□□□ 0.91
CLN6-224ENST00000638076 POP5Q969H6 163 aaKnown RBP20.73■□□□□ 0.91
CLN6-224ENST00000638076 WDR34Q96EX3 536 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 EFCAB11Q9BUY7 163 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 OSBPL10Q9BXB5 764 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 HDAC8Q9BY41 377 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 OBP2AQ9NY56 170 aa20.73■□□□□ 0.91
CLN6-224ENST00000638076 TRANK1O15050 2925 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 TRIM64CA6NLI5 447 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 PCDH7O60245 1069 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 NOBOXO60393 691 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 ZNF682O95780 498 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 MEF2AQ02078 507 aaPredicted RBP20.72■□□□□ 0.91
CLN6-224ENST00000638076 SPIDRQ14159 915 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 VMACQ2NL98 169 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 CACUL1Q86Y37 369 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 ZZZ3Q8IYH5 903 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 TOR3AQ9H497 397 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 THAP10Q9P2Z0 257 aaPredicted RBP20.72■□□□□ 0.91
CLN6-224ENST00000638076 SAMD4AQ9UPU9 718 aaKnown RBP20.72■□□□□ 0.91
CLN6-224ENST00000638076 PIPSLA2A3N6 862 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 IDSP22304 550 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 GJA4P35212 333 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 PPP2R2BQ00005 443 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 RUNX3Q13761 415 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 PAGE2BQ5JRK9 111 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 GPR155Q7Z3F1 870 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 TMEM179BQ7Z7N9 219 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms