RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ZNF682O95780 498 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 JUNBP17275 347 aaPredicted RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 PBLDP30039 288 aaPredicted RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 CAMK1Q14012 370 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 HNRNPA1L2Q32P51 320 aaKnown RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 SHQ1Q6PI26 577 aaKnown RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 SLCO4C1Q6ZQN7 724 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 R3HCC1LQ7Z5L2 792 aaKnown RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 SPRED2Q7Z698 418 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 DSG4Q86SJ6 1040 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 SYTL1Q8IYJ3 562 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 CFAP206Q8IYR0 622 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 C1orf52Q8N6N3 182 aaKnown RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 SETD9Q8NE22 299 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 ISOC1Q96CN7 298 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 C11orf24Q96F05 449 aaPredicted RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 OR4K3Q96R72 315 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 WRAP53Q9BUR4 548 aaKnown RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 GABARAPL1Q9H0R8 117 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 MTIF3Q9H2K0 278 aaKnown RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 DPEP2Q9H4A9 486 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 POLR1BQ9H9Y6 1135 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 IL1RAPQ9NPH3 570 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 VPS4AQ9UN37 437 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 MYOFQ9NZM1 2061 aa11.71□□□□□ -0.54
CLN8-212ENST00000637083 LOC100130705A0A1B0GUX0 176 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 NPC1O15118 1278 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 SLC16A6O15403 523 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 UGT2B11O75310 529 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 KCNK5O95279 499 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 FABP3P05413 133 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 TIA1P31483 386 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLN8-212ENST00000637083 KDELR2P33947 212 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 WNT3P56703 355 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ELAVL3Q14576 367 aaKnown RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 SKIV2LQ15477 1246 aaKnown RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 TEAD4Q15561 434 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 POM121L1PQ3SYA9 428 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 LRRC23Q53EV4 343 aaPredicted RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 ZNF697Q5TEC3 545 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 RAET1GQ6H3X3 334 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 OR2T5Q6IEZ7 315 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 GALNT18Q6P9A2 607 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 EIF3MQ7L2H7 374 aaKnown RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 TMPRSS11BQ86T26 416 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 TRAPPC5Q8IUR0 188 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ZZZ3Q8IYH5 903 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 CPA6Q8N4T0 437 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 OR9A1PQ8NGU1 263 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 OR2T29Q8NH02 315 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 HUS1BQ8NHY5 278 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 CDC26Q8NHZ8 85 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 SETD7Q8WTS6 366 aaKnown RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 BHLHE41Q9C0J9 482 aaPredicted RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 ADNPQ9H2P0 1102 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 SOX17Q9H6I2 414 aaPredicted RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 GNG14A0A1W2PPG7 69 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 C1QTNF3-AMACRE9PGA6 284 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 RNASET2O00584 256 aaKnown RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 PI15O43692 258 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ABCB7O75027 752 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 DNAJB5O75953 348 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 CPNE6O95741 557 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ABCB1P08183 1280 aaPredicted RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 C1GALT1C1LP0DN25 315 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ITGAMP11215 1152 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 DCKP27707 260 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 RYKP34925 604 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 TBPL1P62380 186 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 SPIDRQ14159 915 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 TMEM52BQ4KMG9 183 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 UNC5DQ6UXZ4 953 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 CBLL1Q75N03 491 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 TRMT11Q7Z4G4 463 aaKnown RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 HORMAD1Q86X24 394 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 NPAS3Q8IXF0 933 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ETFBKMTQ8IXQ9 262 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ZNF480Q8WV37 535 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 HERVK_113Q902F9 699 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 SMG7Q92540 1137 aaKnown RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 RAB7BQ96AH8 199 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ZNF707Q96C28 371 aaPredicted RBP11.7□□□□□ -0.54
CLN8-212ENST00000637083 COQ8BQ96D53 544 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 LRRC3BQ96PB8 259 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 OR2AG1Q9H205 316 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 SMURF2Q9HAU4 748 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 TPT1P8Q9HAU6 139 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ADPRHL2Q9NX46 363 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ATXN10Q9UBB4 475 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 ATP6V1HQ9UI12 483 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 SNX5Q9Y5X3 404 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 HSPE1-MOB4S4R3N1 261 aa11.7□□□□□ -0.54
CLN8-212ENST00000637083 LINC01553A4QN01 128 aa11.69□□□□□ -0.54
CLN8-212ENST00000637083 PCDH7O60245 1069 aa11.69□□□□□ -0.54
CLN8-212ENST00000637083 NOBOXO60393 691 aa11.69□□□□□ -0.54
CLN8-212ENST00000637083 LAMP1P11279 417 aa11.69□□□□□ -0.54
CLN8-212ENST00000637083 C6P13671 934 aa11.69□□□□□ -0.54
CLN8-212ENST00000637083 ADRB3P13945 408 aa11.69□□□□□ -0.54
CLN8-212ENST00000637083 RPL10P27635 214 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms