RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ADAM15Q13444 863 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 CAPRIN1Q14444 709 aaKnown RBP11.15□□□□□ -0.62
CLN6-217ENST00000636964 OXA1LQ15070 435 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 AP5B1Q2VPB7 878 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 C2orf27AQ580R0 203 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 GALNT18Q6P9A2 607 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 CRTC3Q6UUV7 619 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 EFL1Q7Z2Z2 1120 aaKnown RBP11.15□□□□□ -0.62
CLN6-217ENST00000636964 CFAP206Q8IYR0 622 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 MCOLN3Q8TDD5 553 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 SLC32A1Q9H598 525 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 MAP10Q9P2G4 905 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 SNX13Q9Y5W8 968 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 GFYI3L273 518 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 JRKO75564 520 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 AP2A2O94973 939 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 PCDH8O95206 1070 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 APODP05090 189 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 SLC2A4P14672 509 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 MLLT3P42568 568 aaPredicted RBP11.15□□□□□ -0.62
CLN6-217ENST00000636964 BDKRB1P46663 353 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 ATP4BP51164 291 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 RGS21Q2M5E4 152 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 ITPRIPL2Q3MIP1 535 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 C6orf132Q5T0Z8 1188 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 DOK6Q6PKX4 331 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 NRSN1Q8IZ57 195 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 CXorf40AQ8TE69 158 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 KLK6Q92876 244 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 VPS35Q96QK1 796 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 CCM2Q9BSQ5 444 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 S1PR5Q9H228 398 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 AIG1Q9NVV5 245 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 SERGEFQ9UGK8 458 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 ZNF490Q9ULM2 529 aaPredicted RBP11.15□□□□□ -0.62
CLN6-217ENST00000636964 ARHGEF33A8MVX0 844 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 C1QTNF3-AMACRE9PGA6 284 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 H0Y858 1186 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 AXIN1O15169 862 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 ICMTO60725 284 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 RNGTTO60942 597 aaKnown RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 ULK1O75385 1050 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 SLCO2B1O94956 709 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 KCNH1O95259 989 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 CYP2A7P20853 494 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 ERVK-8P63133 956 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 PLIN5Q00G26 463 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 METTL11BQ5VVY1 283 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 SPATA19Q7Z5L4 167 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 Q8N9G6 341 aaPredicted RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 TRUB1Q8WWH5 349 aaKnown RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 UHRF1Q96T88 793 aaPredicted RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 SLC6A17Q9H1V8 727 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 GULP1Q9UBP9 304 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 COL4A3Q01955 1670 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 A0A087WXM4 84 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 IGLON5A6NGN9 336 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 PSMD11O00231 422 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 ANGPT2O15123 496 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 KPNA5O15131 536 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 TIPRLO75663 272 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 EPN2O95208 641 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 MPC1LP0DKB6 136 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 G6PDP11413 515 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 CFL1P23528 166 aaKnown RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 IL12AP29459 219 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 SOX11P35716 441 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 YAP1P46937 504 aaKnown RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 PRLHRP49683 370 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 IFITM2Q01629 132 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 PRKCQQ04759 706 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 C6orf10Q5SRN2 563 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 CYP2R1Q6VVX0 501 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 DSG4Q86SJ6 1040 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 RNF175Q8N4F7 328 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 ELSPBP1Q96BH3 223 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 FBXL20Q96IG2 436 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 SPACA7Q96KW9 195 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 NFKBIL1Q9UBC1 381 aaPredicted RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 NDUFAF1Q9Y375 327 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 SPEF1Q9Y4P9 236 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 POLR3HQ9Y535 204 aaPredicted RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 PCDHGA3Q9Y5H0 932 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 PCYT1BQ9Y5K3 369 aaPredicted RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 A0A1W2PRQ8 180 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 GRXCR2A6NFK2 248 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 SLC22A3O75751 556 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 CTRB1P17538 263 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 MAP4P27816 1152 aaKnown RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 DRD3P35462 400 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 RPL38P63173 70 aaKnown RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 TSTA3Q13630 321 aaPredicted RBP11.14□□□□□ -0.63
CLN6-217ENST00000636964 NUMA1Q14980 2115 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 CTRB2Q6GPI1 263 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 UBTD2Q8WUN7 234 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 MED8Q96G25 268 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 FANCEQ9HB96 536 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 GID8Q9NWU2 228 aa11.14□□□□□ -0.63
CLN6-217ENST00000636964 ZFC3H1O60293 1989 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms