RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 A0A0A6YYC8 382 aaPredicted RBP17.04■□□□□ 0.32
PNKP-225ENST00000636214 IDSB3KWA1 339 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 I3L1I5 382 aaPredicted RBP17.04■□□□□ 0.32
PNKP-225ENST00000636214 FDXRP22570 491 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 CCND1P24385 295 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 MRPL49Q13405 166 aaKnown RBP17.04■□□□□ 0.32
PNKP-225ENST00000636214 PDAP1Q13442 181 aaKnown RBP17.04■□□□□ 0.32
PNKP-225ENST00000636214 EIF2S3LQ2VIR3 472 aaKnown RBP17.04■□□□□ 0.32
PNKP-225ENST00000636214 ISLR2Q6UXK2 745 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 CYHR1Q6ZMK1 362 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 NDUFAF7Q7L592 441 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 C17orf64Q86WR6 236 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 PLD3Q8IV08 490 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 GPATCH11Q8N954 259 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 C8orf44Q96CB5 159 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 LINGO1Q96FE5 620 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 CAPZA3Q96KX2 299 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 TRIM54Q9BYV2 358 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 RIC8BQ9NVN3 520 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 NOVA2Q9UNW9 492 aaKnown RBP17.04■□□□□ 0.32
PNKP-225ENST00000636214 PCDHGA10Q9Y5H3 936 aa17.04■□□□□ 0.32
PNKP-225ENST00000636214 ANKUB1A6NFN9 424 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 FFAR3O14843 346 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 SLC16A5O15375 505 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 GPR42O15529 346 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 EEF1A2Q05639 463 aaKnown RBP17.03■□□□□ 0.32
PNKP-225ENST00000636214 CDC16Q13042 620 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 FAM53BQ14153 422 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 ZNF169Q14929 603 aaPredicted RBP17.03■□□□□ 0.32
PNKP-225ENST00000636214 TLR1Q15399 786 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 MFSD4BQ5TF39 518 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 FAAH2Q6GMR7 532 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 SYDE1Q6ZW31 735 aaPredicted RBP17.03■□□□□ 0.32
PNKP-225ENST00000636214 CUZD1Q86UP6 607 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 KLHL7Q8IXQ5 586 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 CAMKVQ8NCB2 501 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 EEF1AKMT1Q8WVE0 214 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 METTL21AQ8WXB1 218 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 SLCO2A1Q92959 643 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 THAP11Q96EK4 314 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 CERS2Q96G23 380 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 CFAP36Q96G28 342 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 PSMG3-AS1Q96PY0 264 aa17.03■□□□□ 0.32
PNKP-225ENST00000636214 ZBTB20Q9HC78 741 aaPredicted RBP17.03■□□□□ 0.32
PNKP-225ENST00000636214 DYTNA2CJ06 578 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 P2RX6O15547 441 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 BANF1O75531 89 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 WFS1O76024 890 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 SLC26A3P40879 764 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 ARL4CP56559 192 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 IL2P60568 153 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 ARG2P78540 354 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 DR1Q01658 176 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 MORF4L2Q15014 288 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 CRB2Q5IJ48 1285 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 ATG9BQ674R7 924 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 CAPN13Q6MZZ7 669 aaPredicted RBP17.02■□□□□ 0.32
PNKP-225ENST00000636214 AGTRAPQ6RW13 159 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 PAQR3Q6TCH7 311 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 LINC00696Q6ZRV3 163 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 CNTN4Q8IWV2 1026 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 LRRC56Q8IYG6 542 aaPredicted RBP17.02■□□□□ 0.32
PNKP-225ENST00000636214 TBC1D19Q8N5T2 526 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 LMF1Q96S06 567 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 ATG10Q9H0Y0 220 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 MKL2Q9ULH7 1088 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 CORO1CQ9ULV4 474 aaPredicted RBP17.02■□□□□ 0.32
PNKP-225ENST00000636214 CHMP2BQ9UQN3 213 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 PDE10AQ9Y233 779 aa17.02■□□□□ 0.32
PNKP-225ENST00000636214 DDAH2O95865 285 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 COX6A1P12074 109 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 PAFAH1B1P43034 410 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 TSFMP43897 325 aaKnown RBP17.01■□□□□ 0.31
PNKP-225ENST00000636214 GNG11P61952 73 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 MFAP5Q13361 173 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 NAE1Q13564 534 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 RBM20Q5T481 1227 aaKnown RBP17.01■□□□□ 0.31
PNKP-225ENST00000636214 B3GNTL1Q67FW5 361 aaPredicted RBP17.01■□□□□ 0.31
PNKP-225ENST00000636214 FAM45BPQ6NSW5 357 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 IGFL2Q6UWQ7 119 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 GALNT7Q86SF2 657 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 LAPTM4BQ86VI4 370 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 AMER3Q8N944 861 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 FAM45AQ8TCE6 357 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 ATL1Q8WXF7 558 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 HAUS8Q9BT25 410 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 FAM129AQ9BZQ8 928 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 TGIF2Q9GZN2 237 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 ANKHQ9HCJ1 492 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 ARL15Q9NXU5 204 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 PTGFRNQ9P2B2 879 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 C19orf25Q9UFG5 118 aaPredicted RBP17.01■□□□□ 0.31
PNKP-225ENST00000636214 ADAMTS6Q9UKP5 1117 aa17.01■□□□□ 0.31
PNKP-225ENST00000636214 CYSRT1A8MQ03 144 aa17■□□□□ 0.31
PNKP-225ENST00000636214 H0YIG0 161 aa17■□□□□ 0.31
PNKP-225ENST00000636214 NDC80O14777 642 aa17■□□□□ 0.31
PNKP-225ENST00000636214 FOXS1O43638 330 aa17■□□□□ 0.31
PNKP-225ENST00000636214 SEMA7AO75326 666 aa17■□□□□ 0.31
PNKP-225ENST00000636214 NSA2O95478 260 aaKnown RBP17■□□□□ 0.31
PNKP-225ENST00000636214 AHSGP02765 367 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms