RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 C1orf226A1L170 272 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 FUOMA2VDF0 154 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 ARHGEF33A8MVX0 844 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 NRG2O14511 850 aaPredicted RBP12.34□□□□□ -0.43
LINC00540-203ENST00000631321 BNIP3LO60238 219 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 LAMP1P11279 417 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 IMPDH2P12268 514 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 CYP4B1P13584 511 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 PPIBP23284 216 aaKnown RBP12.34□□□□□ -0.43
LINC00540-203ENST00000631321 FSHRP23945 695 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 HNF4AP41235 474 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 MAP2K4P45985 399 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 DOC2AQ14183 400 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 XKR6Q5GH73 641 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.34□□□□□ -0.43
LINC00540-203ENST00000631321 LDLRAP1Q5SW96 308 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 ASTLQ6HA08 431 aaPredicted RBP12.34□□□□□ -0.43
LINC00540-203ENST00000631321 NIPAL1Q6NVV3 410 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 BRAT1Q6PJG6 821 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 CLECL1Q8IZS7 167 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 SVOPQ8N4V2 548 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 CHST14Q8NCH0 376 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 IPCEF1Q8WWN9 437 aaPredicted RBP12.34□□□□□ -0.43
LINC00540-203ENST00000631321 ATL1Q8WXF7 558 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 ZNF300Q96RE9 604 aaPredicted RBP12.34□□□□□ -0.43
LINC00540-203ENST00000631321 EPYCQ99645 322 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 DPH2Q9BQC3 489 aaPredicted RBP12.34□□□□□ -0.43
LINC00540-203ENST00000631321 WDR12Q9GZL7 423 aaKnown RBP12.34□□□□□ -0.43
LINC00540-203ENST00000631321 FAM83DQ9H4H8 585 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 TPT1P8Q9HAU6 139 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 CD84Q9UIB8 345 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 SH3GLB1Q9Y371 365 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 MICAL3Q7RTP6 2002 aa12.34□□□□□ -0.43
LINC00540-203ENST00000631321 DIRAS1O95057 198 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 MT-ND2P03891 347 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 CTSAP10619 480 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 EFNA1P20827 205 aaPredicted RBP12.33□□□□□ -0.43
LINC00540-203ENST00000631321 NR4A1P22736 598 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 VIPR1P32241 457 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 ASMTP46597 345 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 BCAP31P51572 246 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 PSMD7P51665 324 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 CRYBA2P53672 197 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 RAE1P78406 368 aaKnown RBP12.33□□□□□ -0.43
LINC00540-203ENST00000631321 ACSM2AQ08AH3 577 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 PROX2Q3B8N5 592 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 ADPRMQ3LIE5 342 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 ACSM2BQ68CK6 577 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 GDPD4Q6W3E5 623 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 PRSS48Q7RTY5 328 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 CCDC71Q8IV32 467 aaPredicted RBP12.33□□□□□ -0.43
LINC00540-203ENST00000631321 S100ZQ8WXG8 99 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 TIFAQ96CG3 184 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 DUSP26Q9BV47 211 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 BBS2Q9BXC9 721 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 GABARAPL3Q9BY60 117 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 REEP1Q9H902 201 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 HMG20AQ9NP66 347 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 KRT84Q9NSB2 600 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 THUMPD1Q9NXG2 353 aaKnown RBP12.33□□□□□ -0.43
LINC00540-203ENST00000631321 CORO2BQ9UQ03 480 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 BTBD3Q9Y2F9 522 aa12.33□□□□□ -0.43
LINC00540-203ENST00000631321 E7EQ34 232 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 QSOX1O00391 747 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 RGS10O43665 173 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 MTX2O75431 263 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 MYO1DO94832 1006 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 FKBP9O95302 570 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 CPSF4O95639 269 aaKnown RBP12.33□□□□□ -0.44
LINC00540-203ENST00000631321 C9P02748 559 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 CYP2A6P11509 494 aaPredicted RBP12.33□□□□□ -0.44
LINC00540-203ENST00000631321 PORP16435 677 aaPredicted RBP12.33□□□□□ -0.44
LINC00540-203ENST00000631321 LAG3P18627 525 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 KCNJ10P78508 379 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 RELAQ04206 551 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 ITGADQ13349 1161 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 E2F2Q14209 437 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 CLCA4Q14CN2 919 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 LRRC73Q5JTD7 316 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 ANXA8L1Q5VT79 327 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 CNKSR3Q6P9H4 555 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 HSD11B1LQ7Z5J1 315 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 GALNT10Q86SR1 603 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 SLCO6A1Q86UG4 719 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 P2RY8Q86VZ1 359 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 REM2Q8IYK8 340 aaPredicted RBP12.33□□□□□ -0.44
LINC00540-203ENST00000631321 TMCO5AQ8N6Q1 288 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 SCAMP4Q969E2 229 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 SH3KBP1Q96B97 665 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 COQ8BQ96D53 544 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 VWCEQ96DN2 955 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 ACOT13Q9NPJ3 140 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 FBXO8Q9NRD0 319 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 SLCO3A1Q9UIG8 710 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 PADI2Q9Y2J8 665 aa12.33□□□□□ -0.44
LINC00540-203ENST00000631321 CARNS1A5YM72 827 aa12.32□□□□□ -0.44
LINC00540-203ENST00000631321 GABRR3A8MPY1 467 aa12.32□□□□□ -0.44
LINC00540-203ENST00000631321 TMEM229AB2RXF0 380 aa12.32□□□□□ -0.44
LINC00540-203ENST00000631321 EPHA2P29317 976 aa12.32□□□□□ -0.44
LINC00540-203ENST00000631321 PCGF2P35227 344 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms