RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 C1orf52Q8N6N3 182 aaKnown RBP17.2■□□□□ 0.34
FARP1-242ENST00000627049 ZNF655Q8N720 491 aaPredicted RBP17.2■□□□□ 0.34
FARP1-242ENST00000627049 EXOSC8Q96B26 276 aaKnown RBP17.2■□□□□ 0.34
FARP1-242ENST00000627049 DNAJC27Q9NZQ0 273 aa17.2■□□□□ 0.34
FARP1-242ENST00000627049 AASSQ9UDR5 926 aa17.2■□□□□ 0.34
FARP1-242ENST00000627049 GPR45Q9Y5Y3 372 aa17.2■□□□□ 0.34
FARP1-242ENST00000627049 INMT-MINDY4F8WBC2 141 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 OR1I1O60431 355 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 PRAMEF11O60813 436 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 PEPDP12955 493 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 ERP29P30040 261 aaKnown RBP17.19■□□□□ 0.34
FARP1-242ENST00000627049 SHMT2P34897 504 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 ADAM15Q13444 863 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 AGAP7PQ5VUJ5 663 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 UMODL1-AS1Q8N2C9 162 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 RACGAP1Q9H0H5 632 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 TMEM45AQ9NWC5 275 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.19■□□□□ 0.34
FARP1-242ENST00000627049 AP3S2P59780 193 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 CCDC36Q8IYA8 594 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 HTATIP2Q9BUP3 242 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 ZNF451Q9Y4E5 1061 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 H1F0P07305 194 aaKnown RBP17.19■□□□□ 0.34
FARP1-242ENST00000627049 HTR2BP41595 481 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 DPP6P42658 865 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 GPR1P46091 355 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 CNTN4Q8IWV2 1026 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 GJD3Q8N144 294 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 PIGXQ8TBF5 258 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 SMIM30A4D0T7 59 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 SSR2P43308 183 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 GRSF1Q12849 480 aaKnown RBP eCLIP17.19■□□□□ 0.344e-13■□□□□ 9.3
FARP1-242ENST00000627049 TMEM44Q2T9K0 475 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 C9orf64Q5T6V5 341 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 HMBOX1Q6NT76 420 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 GPRIN1Q7Z2K8 1008 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 NFKBIDQ8NI38 313 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 SOCS4Q8WXH5 440 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 FUBP1Q96AE4 644 aaKnown RBP17.19■□□□□ 0.34
FARP1-242ENST00000627049 FAM83DQ9H4H8 585 aa17.19■□□□□ 0.34
FARP1-242ENST00000627049 GRXCR2A6NFK2 248 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 C12orf71A8MTZ7 269 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 TLX2O43763 284 aaPredicted RBP17.18■□□□□ 0.34
FARP1-242ENST00000627049 RYKP34925 604 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 HSPB3Q12988 150 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 POM121L1PQ3SYA9 428 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 C1orf74Q96LT6 269 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 TNKS2Q9H2K2 1166 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 A0A1B0GTW7 788 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 PPP6CO00743 305 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 MID1O15344 667 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 AKAP8O43823 692 aaKnown RBP17.18■□□□□ 0.34
FARP1-242ENST00000627049 ALPLP05186 524 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 MAP2K3P46734 347 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 HTR6P50406 440 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 CCDC157Q569K6 752 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 RAET1GQ6H3X3 334 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 ADNP2Q6IQ32 1131 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 NPAS3Q8IXF0 933 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 GMLQ99445 158 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 C3orf14Q9HBI5 128 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 CD300AQ9UGN4 299 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 HLA-DPB1P04440 258 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 ALPIP09923 528 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 CD247P20963 164 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 HTR1BP28222 390 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 DSTNP60981 165 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 PTCHD3Q3KNS1 767 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 OLIG1Q8TAK6 271 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 SMG7Q92540 1137 aaKnown RBP17.18■□□□□ 0.34
FARP1-242ENST00000627049 GOLGA4Q13439 2230 aaKnown RBP17.18■□□□□ 0.34
FARP1-242ENST00000627049 A0A1B0GUL6 1792 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 SOX14O95416 240 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 HAPLN1P10915 354 aaPredicted RBP17.18■□□□□ 0.34
FARP1-242ENST00000627049 STOMP27105 288 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 OR1D2P34982 312 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 OR1E2P47887 323 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 AP1S2P56377 157 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 VARS2Q5ST30 1063 aaKnown RBP17.18■□□□□ 0.34
FARP1-242ENST00000627049 FAM220AQ7Z4H9 259 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 DNAJB7Q7Z6W7 309 aaPredicted RBP17.18■□□□□ 0.34
FARP1-242ENST00000627049 ZNF557Q8N988 423 aaPredicted RBP17.18■□□□□ 0.34
FARP1-242ENST00000627049 OR5AK3PQ8NH89 298 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 PCDHGA3Q9Y5H0 932 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 CLCA3PQ9Y6N3 262 aa17.18■□□□□ 0.34
FARP1-242ENST00000627049 ISM1B1AKI9 464 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 ZNF24P17028 368 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 RGS8P57771 180 aaPredicted RBP17.17■□□□□ 0.34
FARP1-242ENST00000627049 ERVPABLB-1P60509 514 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 KEAP1Q14145 624 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 PM20D1Q6GTS8 502 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 OOSP2Q86WS3 158 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 MUL1Q969V5 352 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 AIF1LQ9BQI0 150 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 CHIAQ9BZP6 476 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 ZBTB20Q9HC78 741 aaPredicted RBP17.17■□□□□ 0.34
FARP1-242ENST00000627049 STARD7Q9NQZ5 370 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 MRPL17Q9NRX2 175 aaKnown RBP17.17■□□□□ 0.34
FARP1-242ENST00000627049 RDH8Q9NYR8 311 aa17.17■□□□□ 0.34
FARP1-242ENST00000627049 CKMT1AP12532 417 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms