RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 PEX16Q9Y5Y5 336 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 GRXCR2A6NFK2 248 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 WASH4PA8MWX3 477 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 EPN2O95208 641 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 PRLP01236 227 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 PTPN2P17706 415 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 KIR3DL1P43629 444 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 HTR3AP46098 478 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 OR1G1P47890 313 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 UBE3AQ05086 875 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 SLC46A3Q7Z3Q1 461 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 SERPINA9Q86WD7 417 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 ZNF683Q8IZ20 524 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 SLC5A8Q8N695 610 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 WDR36Q8NI36 951 aaKnown RBP13.45□□□□□ -0.26
UBE3A-209ENST00000625778 TLR8Q9NR97 1041 aaKnown RBP13.45□□□□□ -0.26
UBE3A-209ENST00000625778 MS4A12Q9NXJ0 267 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 SPASTQ9UBP0 616 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 FAM172BPA6NC97 362 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 COX7A2P14406 83 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 UGT2B15P54855 530 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 CXCR4P61073 352 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 SPIBQ01892 262 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 FADDQ13158 208 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 PCBP2Q15366 365 aaKnown RBP eCLIP13.45□□□□□ -0.261e-7■■■□□ 17.9
UBE3A-209ENST00000625778 VMACQ2NL98 169 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 UAP1L1Q3KQV9 507 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 LRRC66Q68CR7 880 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 NADSYN1Q6IA69 706 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 RAB43Q86YS6 212 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 SYT12Q8IV01 421 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 BEND7Q8N7W2 519 aaPredicted RBP13.45□□□□□ -0.26
UBE3A-209ENST00000625778 GPR151Q8TDV0 419 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 TRIB3Q96RU7 358 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 SLC30A2Q9BRI3 323 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 AP5M1Q9H0R1 490 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 KCNH6Q9H252 994 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 TOR4AQ9NXH8 423 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 GABRQQ9UN88 632 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 LYVE1Q9Y5Y7 322 aa13.45□□□□□ -0.26
UBE3A-209ENST00000625778 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
UBE3A-209ENST00000625778 ANKRD66B4E2M5 251 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 TNFRSF11BO00300 401 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 PRAMEF1O95521 474 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 KRT6AP02538 564 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 ESR1P03372 595 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 KRT6BP04259 564 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 ACPPP15309 386 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 PRKACAP17612 351 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 SSTR4P31391 388 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 PIK3CBP42338 1070 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 KRT6CP48668 564 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 RGS6P49758 472 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 CAMKK1Q8N5S9 505 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 OR9Q2Q8NGE9 314 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 FBLIM1Q8WUP2 373 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 IL4I1Q96RQ9 567 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 RHCGQ9UBD6 479 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 DHRS7Q9Y394 339 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 C12orf71A8MTZ7 269 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 TSPAN4O14817 238 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 EPOP01588 193 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 GKP32189 559 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 RPL9P32969 192 aaKnown RBP13.44□□□□□ -0.26
UBE3A-209ENST00000625778 TNFSF8P32971 234 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 MRPL19P49406 292 aaKnown RBP13.44□□□□□ -0.26
UBE3A-209ENST00000625778 SNRPD2P62316 118 aaKnown RBP13.44□□□□□ -0.26
UBE3A-209ENST00000625778 POU6F2P78424 691 aaPredicted RBP13.44□□□□□ -0.26
UBE3A-209ENST00000625778 MRPS6P82932 125 aaKnown RBP13.44□□□□□ -0.26
UBE3A-209ENST00000625778 IRF3Q14653 427 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 GANABQ14697 944 aaKnown RBP13.44□□□□□ -0.26
UBE3A-209ENST00000625778 TAF12Q16514 161 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 GNASQ5JWF2 1037 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 CXCL17Q6UXB2 119 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 LINC00299Q6ZSB3 139 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 DENND1CQ8IV53 801 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 CD244Q9BZW8 370 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 MUTYHQ9UIF7 546 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 RPS6KA6Q9UK32 745 aa13.44□□□□□ -0.26
UBE3A-209ENST00000625778 GOLGA4Q13439 2230 aaKnown RBP13.44□□□□□ -0.26
UBE3A-209ENST00000625778 WWP2O00308 870 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 STK16O75716 305 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 WDR47O94967 919 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 SDC1P18827 310 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 HOXD9P28356 352 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-209ENST00000625778 SOX3P41225 446 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 PTGER3P43115 390 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 CCL23P55773 120 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 NKX3-2P78367 333 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 TSTA3Q13630 321 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-209ENST00000625778 CCL14Q16627 93 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 NELL1Q92832 810 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 TP53INP1Q96A56 240 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 ADAM2Q99965 735 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 KATNAL1Q9BW62 490 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 ATG10Q9H0Y0 220 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 CLCA1A8K7I4 914 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 WNT9AO14904 365 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 C9P02748 559 aa13.43□□□□□ -0.26
UBE3A-209ENST00000625778 RHOCP08134 193 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms