RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 E7EVH7 732 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 PRRG2O14669 202 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 P2RX6O15547 441 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 ASNA1O43681 348 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 MAN1A2O60476 641 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 PHF2O75151 1096 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 ADRA1DP25100 572 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 GRIA1P42261 906 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 TTPAP49638 278 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 EIF3BP55884 814 aaKnown RBP13.87□□□□□ -0.19
PNKP-218ENST00000625299 PLAG1Q6DJT9 500 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 TMEM200AQ86VY9 491 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 DOLPP1Q86YN1 238 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 PLD3Q8IV08 490 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 OTUD6BQ8N6M0 293 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 OR9A4Q8NGU2 314 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 PHF10Q8WUB8 498 aaKnown RBP13.87□□□□□ -0.19
PNKP-218ENST00000625299 SMPDL3AQ92484 453 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 ALG3Q92685 438 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 FAM136AQ96C01 138 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 SCMH1Q96GD3 660 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 CYTH2Q99418 400 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 HCN3Q9P1Z3 774 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 TCAF1Q9Y4C2 921 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 IGKV1-8A0A0C4DH67 115 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 OR2W5A6NFC9 320 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 GABRR3A8MPY1 467 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 E9PLN8 166 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 KPNA5O15131 536 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 CD3EAPO15446 510 aaKnown RBP13.86□□□□□ -0.19
PNKP-218ENST00000625299 NDUFS3O75489 264 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 ZNF24P17028 368 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 SNRPNP63162 240 aaKnown RBP13.86□□□□□ -0.19
PNKP-218ENST00000625299 ACVR1Q04771 509 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 SPA17Q15506 151 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 MAPKAPK3Q16644 382 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 NDUFA9Q16795 377 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.86□□□□□ -0.19
PNKP-218ENST00000625299 ICE2Q659A1 982 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 SIAH3Q8IW03 269 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 SHISA5Q8N114 240 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 EID3Q8N140 333 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 PPHLN1Q8NEY8 458 aaKnown RBP13.86□□□□□ -0.19
PNKP-218ENST00000625299 OR9A1PQ8NGU1 263 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 OR2A5Q96R48 311 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 NPAS2Q99743 824 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 VKORC1Q9BQB6 163 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 TRIM51Q9BSJ1 452 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 P2RY12Q9H244 342 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 UTP6Q9NYH9 597 aaKnown RBP13.86□□□□□ -0.19
PNKP-218ENST00000625299 RIMKLBQ9ULI2 386 aa13.86□□□□□ -0.19
PNKP-218ENST00000625299 INTS1Q8N201 2190 aaKnown RBP13.85□□□□□ -0.19
PNKP-218ENST00000625299 SCN3AQ9NY46 2000 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 SOWAHDA6NJG2 315 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 FAM90A27PA6NNH2 459 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 TXNDC9O14530 226 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 HAT1O14929 419 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 SUN1O94901 812 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 CCNDBP1O95273 360 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 SP1P08047 785 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 CD99P14209 185 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 PKMP14618 531 aaKnown RBP13.85□□□□□ -0.19
PNKP-218ENST00000625299 EZRP15311 586 aaKnown RBP13.85□□□□□ -0.19
PNKP-218ENST00000625299 XCR1P46094 333 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 ANKRD20A4Q4UJ75 823 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 H3F3CQ6NXT2 135 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 CEP128Q6ZU80 1094 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 PRSS41Q7RTY9 318 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 ANKRD37Q7Z713 158 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 ARHGEF39Q8N4T4 335 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 HORMAD2Q8N7B1 307 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 PPFIBP2Q8ND30 876 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 DMRTA2Q96SC8 542 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 RBCK1Q9BYM8 510 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 ETNK1Q9HBU6 452 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 LRFN1Q9P244 771 aa13.85□□□□□ -0.19
PNKP-218ENST00000625299 NKX2-6A6NCS4 301 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 ERI2A8K979 691 aaKnown RBP13.84□□□□□ -0.19
PNKP-218ENST00000625299 ARHGEF33A8MVX0 844 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 ADAM10O14672 748 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 NIPSNAP2O75323 286 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 PTGER1P34995 402 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 FAM53BQ14153 422 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 EXT1Q16394 746 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 CTSL3PQ5NE16 218 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 ZNF425Q6IV72 752 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 SLC25A25Q6KCM7 469 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 PAPD4Q6PIY7 484 aaKnown RBP13.84□□□□□ -0.19
PNKP-218ENST00000625299 FGD2Q7Z6J4 655 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 CPSF7Q8N684 471 aaKnown RBP13.84□□□□□ -0.19
PNKP-218ENST00000625299 SLC5A8Q8N695 610 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 ACBD4Q8NC06 268 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 OR51Q1Q8NH59 317 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 NRGNQ92686 78 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 CHRAC1Q9NRG0 131 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 ASB1Q9Y576 335 aa13.84□□□□□ -0.19
PNKP-218ENST00000625299 HCFC1P51610 2035 aa13.83□□□□□ -0.2
PNKP-218ENST00000625299 H0YIG0 161 aa13.83□□□□□ -0.2
PNKP-218ENST00000625299 SGK494L7N484 410 aa13.83□□□□□ -0.2
PNKP-218ENST00000625299 SLC25A12O75746 678 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms