RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 UQCRC1P31930 480 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 MC4RP32245 332 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 ADH7P40394 386 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 ZNF140P52738 457 aaPredicted RBP13.05□□□□□ -0.32
SNX1-214ENST00000625244 EMP3P54852 163 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 CSE1LP55060 971 aaKnown RBP13.05□□□□□ -0.32
SNX1-214ENST00000625244 ARF3P61204 181 aaPredicted RBP13.05□□□□□ -0.32
SNX1-214ENST00000625244 MPP3Q13368 585 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 DAZAP2Q15038 168 aaPredicted RBP13.05□□□□□ -0.32
SNX1-214ENST00000625244 HKDC1Q2TB90 917 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 SLC25A35Q3KQZ1 300 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 GPR33Q49SQ1 333 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 FBXW10Q5XX13 1052 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 WDR53Q7Z5U6 358 aaPredicted RBP13.05□□□□□ -0.32
SNX1-214ENST00000625244 ANKRD37Q7Z713 158 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 SULF2Q8IWU5 870 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 OR8K1Q8NGG5 319 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 OR5M9Q8NGP3 310 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 C16orf52Q8NHV5 167 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.05□□□□□ -0.32
SNX1-214ENST00000625244 ZFYVE21Q9BQ24 234 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 FSD1LQ9BXM9 530 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 FAM215AQ9Y5M1 114 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 C3orf70A6NLC5 250 aaPredicted RBP13.04□□□□□ -0.32
SNX1-214ENST00000625244 ARHGEF9O43307 516 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 AP2A2O94973 939 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 ACVR2AP27037 513 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 TPP2P29144 1249 aaPredicted RBP13.04□□□□□ -0.32
SNX1-214ENST00000625244 ARHGAP25P42331 645 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 SNRPNP63162 240 aaKnown RBP13.04□□□□□ -0.32
SNX1-214ENST00000625244 MSLNQ13421 630 aaPredicted RBP13.04□□□□□ -0.32
SNX1-214ENST00000625244 EXT1Q16394 746 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 SYTL3Q4VX76 610 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 DNAJC21Q5F1R6 531 aaKnown RBP13.04□□□□□ -0.32
SNX1-214ENST00000625244 RTL6Q6ICC9 239 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 LRRC8BQ6P9F7 803 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 TAS2R42Q7RTR8 314 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 PIANPQ8IYJ0 282 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 ZNF567Q8N184 647 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 ARHGEF39Q8N4T4 335 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 SLCO2A1Q92959 643 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 Q96MF0 132 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 APOL2Q9BQE5 337 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 DEFB127Q9H1M4 99 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 SMARCAL1Q9NZC9 954 aa13.04□□□□□ -0.32
SNX1-214ENST00000625244 KLHL8Q9P2G9 620 aaPredicted RBP13.04□□□□□ -0.32
SNX1-214ENST00000625244 C19orf25Q9UFG5 118 aaPredicted RBP13.04□□□□□ -0.32
SNX1-214ENST00000625244 LRRD1A4D1F6 860 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 SOWAHDA6NJG2 315 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 SYT5O00445 386 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 NDC80O14777 642 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 MFAP3LO75121 409 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 PROSCO94903 275 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 FKBP9O95302 570 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 PEX19P40855 299 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 CYB561P49447 251 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 ITGA8P53708 1063 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 DYNLT1P63172 113 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 DBN1Q16643 649 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 MINDY4Q4G0A6 757 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 MFSD4BQ5TF39 518 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 ZNF585AQ6P3V2 769 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 B3GNT6Q6ZMB0 384 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 PID1Q7Z2X4 250 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 PAQR7Q86WK9 346 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 RPS19BP1Q86WX3 136 aaKnown RBP13.03□□□□□ -0.32
SNX1-214ENST00000625244 VRK3Q8IV63 474 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 LGI4Q8N135 537 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 CSNK1A1LQ8N752 337 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 OR2L3Q8NG85 312 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 CFAP61Q8NHU2 1237 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 ANP32BQ92688 251 aaKnown RBP13.03□□□□□ -0.32
SNX1-214ENST00000625244 PLCD4Q9BRC7 762 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 SARGQ9BW04 601 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 MAK16Q9BXY0 300 aaKnown RBP13.03□□□□□ -0.32
SNX1-214ENST00000625244 TRIM45Q9H8W5 580 aaPredicted RBP13.03□□□□□ -0.32
SNX1-214ENST00000625244 ABHD10Q9NUJ1 306 aa13.03□□□□□ -0.32
SNX1-214ENST00000625244 SAE1Q9UBE0 346 aaPredicted RBP13.03□□□□□ -0.32
SNX1-214ENST00000625244 A0A0U1RQJ8 604 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 OR2A25A4D2G3 310 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 TRIM64A6NGJ6 449 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 TRIM64BA6NI03 449 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 PEX1O43933 1283 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 CRTAMO95727 393 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 FTH1P02794 183 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 CDC25BP30305 580 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 CBLBQ13191 982 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 MESDQ14696 234 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 HMBOX1Q6NT76 420 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 PAPD4Q6PIY7 484 aaKnown RBP13.02□□□□□ -0.33
SNX1-214ENST00000625244 RANBP10Q6VN20 620 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 P3H2Q8IVL5 708 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 DCUN1D3Q8IWE4 304 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 KIF2BQ8N4N8 673 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 ZFP62Q8NB50 900 aaPredicted RBP13.02□□□□□ -0.33
SNX1-214ENST00000625244 TFB1MQ8WVM0 346 aaKnown RBP13.02□□□□□ -0.33
SNX1-214ENST00000625244 TMEM125Q96AQ2 219 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 DNAJC1Q96KC8 554 aaKnown RBP13.02□□□□□ -0.33
SNX1-214ENST00000625244 DNAJC7Q99615 494 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 GORASP1Q9BQQ3 440 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms