RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 PCDHB5Q9Y5E4 795 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 ANKRD66B4E2M5 251 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 SLC28A1O00337 649 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 NUPL2O15504 423 aaKnown RBP17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 RPS17P08708 135 aaKnown RBP17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 FPR1P21462 350 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 RFX3P48380 749 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 PSMD8P48556 350 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 ZNF267Q14586 743 aaPredicted RBP17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 BTBD16Q32M84 506 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 SYTL3Q4VX76 610 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 SETMARQ53H47 684 aaPredicted RBP17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 RFPL4BQ6ZWI9 263 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 USP51Q70EK9 711 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 AADATQ8N5Z0 425 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 OR6C4Q8NGE1 309 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 DYNC2LI1Q8TCX1 351 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 SNAPC3Q92966 411 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 TMEM245Q9H330 911 aa17.81■□□□□ 0.44
GTF2IP1-210ENST00000622829 MANBAO00462 879 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 CASKO14936 926 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 ONECUT3O60422 494 aaPredicted RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 LRRC26Q2I0M4 334 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 TTLL9Q3SXZ7 439 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 PLEKHH3Q7Z736 793 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 LAX1Q8IWV1 398 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 PAPD5Q8NDF8 572 aaKnown RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 NLKQ9UBE8 527 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 SATB2Q9UPW6 733 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 A0A1W2PQ09 198 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 DDX5P17844 614 aaKnown RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 PSMA1P25786 263 aaKnown RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 PIK3CBP42338 1070 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 HNRNPA0Q13151 305 aaKnown RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 CLEC12AQ5QGZ9 265 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 C22orf42Q6IC83 251 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 USP30Q70CQ3 517 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 CYP2U1Q7Z449 544 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 MFSD4AQ8N468 514 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 GLB1L3Q8NCI6 653 aaPredicted RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 RHEBL1Q8TAI7 183 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 PIGKQ92643 395 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 ACBD6Q9BR61 282 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 MAP1BP46821 2468 aaKnown RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 TBKBP1A7MCY6 615 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 KCNE1P15382 129 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 TNFSF8P32971 234 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 PPM1FP49593 454 aaPredicted RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 LAIR1Q6GTX8 287 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 LKAAEAR1Q8TD35 194 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 ZBED3Q96IU2 234 aaPredicted RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 DOK1Q99704 481 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 CLN6Q9NWW5 311 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 STMN3Q9NZ72 180 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 B3GNT3Q9Y2A9 372 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 SPIN1Q9Y657 262 aaPredicted RBP17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 BRCA2P51587 3418 aa17.8■□□□□ 0.44
GTF2IP1-210ENST00000622829 SMIM35A0A1B0GVV1 85 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 I3L521 148 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 ANXA4P09525 319 aaPredicted RBP17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 ETFAP13804 333 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 CDC42EP1Q00587 391 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 SNAPC1Q16533 368 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 CRTC2Q53ET0 693 aaPredicted RBP17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 C10orf62Q5T681 223 aaPredicted RBP17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 MTFR2Q6P444 385 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 LYPD8Q6UX82 237 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 IQCF1Q8N6M8 205 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 ZNF382Q96SR6 550 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 ZFYVE1Q9HBF4 777 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 ZNF224Q9NZL3 707 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 LRRTM2O43300 516 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 TBL1XO60907 577 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 C7P10643 843 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 CHRNB1P11230 501 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 LAMP1P11279 417 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 IL10RBQ08334 325 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 GALNT1Q10472 559 aaPredicted RBP17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 SERINC3Q13530 473 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 CHRNA6Q15825 494 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 VARS2Q5ST30 1063 aaKnown RBP17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 AGAP6Q5VW22 663 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 C16orf62Q7Z3J2 963 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 RIMKLAQ8IXN7 391 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 AQP11Q8NBQ7 271 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 AGAP4Q96P64 663 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 TBX5Q99593 518 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 ACTL8Q9H568 366 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 MOV10Q9HCE1 1003 aaKnown RBP17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 IL20RAQ9UHF4 553 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 SMUG1Q53HV7 270 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 PTRH1Q86Y79 214 aaKnown RBP17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 MYLIPQ8WY64 445 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 HOXD1Q9GZZ0 328 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 FBXO44Q9H4M3 255 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 SIRT5Q9NXA8 310 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 QPCTLQ9NXS2 382 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 HCSTQ9UBK5 93 aa17.79■□□□□ 0.44
GTF2IP1-210ENST00000622829 TRAV6A0A075B6T7 132 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms