RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 MSLNLQ96KJ4 702 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 INPP5KQ9BT40 448 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 CLMPQ9H6B4 373 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 RMND5AQ9H871 391 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 DDX18Q9NVP1 670 aaKnown RBP9.58□□□□□ -0.88
VTA1-205ENST00000620996 INVSQ9Y283 1065 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 H0Y8X5 98 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 ABCB1P08183 1280 aaPredicted RBP9.58□□□□□ -0.88
VTA1-205ENST00000620996 MYCLP1P12525 358 aaPredicted RBP9.58□□□□□ -0.88
VTA1-205ENST00000620996 IGFALSP35858 605 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 CCR3P51677 355 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 CSTF3Q12996 717 aaKnown RBP9.58□□□□□ -0.88
VTA1-205ENST00000620996 KIAA0040Q15053 153 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 SLCO4C1Q6ZQN7 724 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 PNPT1Q8TCS8 783 aaKnown RBP9.58□□□□□ -0.88
VTA1-205ENST00000620996 REPS1Q96D71 796 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 LINC00615Q96LM1 132 aaPredicted RBP9.58□□□□□ -0.88
VTA1-205ENST00000620996 ANKRD27Q96NW4 1050 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 SPNS1Q9H2V7 528 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 INIPQ9NRY2 104 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 GPRC5BQ9NZH0 403 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 SH3BP4Q9P0V3 963 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 WDR37Q9Y2I8 494 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 DOCK9Q9BZ29 2069 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 KIAA1549LQ6ZVL6 1849 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 PIPSLA2A3N6 862 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 RFXANKO14593 260 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 PLRG1O43660 514 aaKnown RBP9.58□□□□□ -0.88
VTA1-205ENST00000620996 PI15O43692 258 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 UGDHO60701 494 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 STATHP02808 62 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 C1GALT1C1LP0DN25 315 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 HSD17B1P14061 328 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 ACADLP28330 430 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 KIR3DL1P43629 444 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 PSMD7P51665 324 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 CLDN8P56748 225 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 CYP4F3Q08477 520 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 ENPP2Q13822 863 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 GLYATQ6IB77 296 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 KIAA1161Q6NSJ0 714 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 ENPP7Q6UWV6 458 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 UNC5DQ6UXZ4 953 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 DLEU7Q6UYE1 221 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 ZNF621Q6ZSS3 439 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 C17orf64Q86WR6 236 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 WDR20Q8TBZ3 569 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 GTF2H4Q92759 462 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 NSMCE2Q96MF7 247 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 TEX101Q9BY14 249 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 PPT2Q9UMR5 302 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 OXTRP30559 389 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 SLC7A1P30825 629 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 ACSL1P33121 698 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 TFF2Q03403 129 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 CYP2A13Q16696 494 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 AASDHQ4L235 1098 aaPredicted RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 NXPE4Q6UWF7 544 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 PDSS2Q86YH6 399 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 FAM20CQ8IXL6 584 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 SLC44A3Q8N4M1 653 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 RAB42Q8N4Z0 105 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 OR2T12Q8NG77 320 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 MPP4Q96JB8 637 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 PANX1Q96RD7 426 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 CIB1Q99828 191 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 GABRG3Q99928 467 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 APOOQ9BUR5 198 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 REXO4Q9GZR2 422 aaKnown RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 SPASTQ9UBP0 616 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 RUVBL1Q9Y265 456 aaKnown RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 SH3GLB1Q9Y371 365 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 TMED5Q9Y3A6 229 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 FEZF1A0PJY2 475 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 POM121BA6NF01 834 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 GRXCR2A6NFK2 248 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 H0YIV9 168 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 PCDH7O60245 1069 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 FUCA1P04066 466 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 C8BP07358 591 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 NDUFV2P19404 249 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 DRD1P21728 446 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 EEFSECP57772 596 aaKnown RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 ZNF658BQ4V348 819 aaPredicted RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 METRNLQ641Q3 311 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 PLD3Q8IV08 490 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 FAM9CQ8IZT9 166 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 SIX5Q8N196 739 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 TMEM132CQ8N3T6 1108 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 FBXO30Q8TB52 745 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 NELL1Q92832 810 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 FAM162AQ96A26 154 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 FAM120BQ96EK7 910 aaKnown RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 ITCHQ96J02 903 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 RNF145Q96MT1 663 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 UHRF1Q96T88 793 aaPredicted RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 EFCAB11Q9BUY7 163 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 PRDM8Q9NQV8 689 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 ACTR3BQ9P1U1 418 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 RIMS3Q9UJD0 308 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms