RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 MTX3Q5HYI7 312 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 GALNT18Q6P9A2 607 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 PAPD5Q8NDF8 572 aaKnown RBP18.34■□□□□ 0.53
PSPC1-206ENST00000619300 GPR156Q8NFN8 814 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 STARD8Q92502 1023 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 MRGPRX1Q96LB2 322 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 MENTQ9BUN1 341 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 REXO4Q9GZR2 422 aaKnown RBP18.34■□□□□ 0.53
PSPC1-206ENST00000619300 SPNS1Q9H2V7 528 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 OSGEPL1Q9H4B0 414 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 KAT8Q9H7Z6 458 aaKnown RBP18.34■□□□□ 0.53
PSPC1-206ENST00000619300 COQ10BQ9H8M1 238 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 SIRT5Q9NXA8 310 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 LIMD1Q9UGP4 676 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 ANAPC2Q9UJX6 822 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 MAPRE3Q9UPY8 281 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 INVSQ9Y283 1065 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 TSC22D4Q9Y3Q8 395 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 MAGEA13PA6NCF6 341 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 CACNB4O00305 520 aaPredicted RBP18.33■□□□□ 0.53
PSPC1-206ENST00000619300 RFXANKO14593 260 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 B3GALT4O96024 378 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 COX7A2P14406 83 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 FASP25445 335 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 TRPC1P48995 793 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 WNT3P56703 355 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 PPP2CBP62714 309 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 PPP2CAP67775 309 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 PYCR3Q53H96 274 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 FAM124AQ86V42 546 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 FAM129CQ86XR2 697 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 FERD3LQ96RJ6 166 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 INSM2Q96T92 566 aaPredicted RBP18.33■□□□□ 0.53
PSPC1-206ENST00000619300 NRTNQ99748 197 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 CPPED1Q9BRF8 314 aaPredicted RBP18.33■□□□□ 0.53
PSPC1-206ENST00000619300 ACAT2Q9BWD1 397 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 GORASP2Q9H8Y8 452 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 AGPAT4Q9NRZ5 378 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 SPATA7Q9P0W8 599 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 RAB26Q9ULW5 256 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 SUFUQ9UMX1 484 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 KCNK6Q9Y257 313 aa18.33■□□□□ 0.53
PSPC1-206ENST00000619300 H0YJX3 145 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 LATO43561 262 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 DENRO43583 198 aaKnown RBP18.33■□□□□ 0.52
PSPC1-206ENST00000619300 TGFB1P01137 390 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 GSNP06396 782 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 ACADMP11310 421 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 TIA1P31483 386 aaKnown RBP eCLIP18.33■□□□□ 0.523e-6■■■■□ 19.7
PSPC1-206ENST00000619300 CDKN2CP42773 168 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 SFSWAPQ12872 951 aaKnown RBP18.33■□□□□ 0.52
PSPC1-206ENST00000619300 DUOXA1Q1HG43 343 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 IER5LQ5T953 404 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 TMIGD1Q6UXZ0 262 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 GCNT7Q6ZNI0 430 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 C17orf64Q86WR6 236 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 KRT78Q8N1N4 520 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 ZNF740Q8NDX6 193 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 ZNF548Q8NEK5 533 aaPredicted RBP18.33■□□□□ 0.52
PSPC1-206ENST00000619300 CDC26Q8NHZ8 85 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 SMPDL3AQ92484 453 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 NELL1Q92832 810 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 DNASE1L2Q92874 299 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 SH3KBP1Q96B97 665 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 C12orf66Q96MD2 445 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 PCBD2Q9H0N5 130 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 TAC3Q9UHF0 121 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 MOSPD1Q9UJG1 213 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 GPSM3Q9Y4H4 160 aa18.33■□□□□ 0.52
PSPC1-206ENST00000619300 DOCK9Q9BZ29 2069 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 ELOVL7A1L3X0 281 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 GSTA4O15217 222 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 SCN2BO60939 215 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 ANXA6P08133 673 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 FCGR1AP12314 374 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 POU3F3P20264 500 aaPredicted RBP18.32■□□□□ 0.52
PSPC1-206ENST00000619300 IGFBP4P22692 258 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 HSPA13P48723 471 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 PRKCQQ04759 706 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 NUMA1Q14980 2115 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 DUS1LQ6P1R4 473 aaKnown RBP18.32■□□□□ 0.52
PSPC1-206ENST00000619300 PHACTR4Q8IZ21 702 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 AURKBQ96GD4 344 aaPredicted RBP18.32■□□□□ 0.52
PSPC1-206ENST00000619300 SCARF2Q96GP6 870 aaPredicted RBP18.32■□□□□ 0.52
PSPC1-206ENST00000619300 MYOCQ99972 504 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 OR51B5Q9H339 312 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 Q9H521 79 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 FAM120CQ9NX05 1096 aaKnown RBP18.32■□□□□ 0.52
PSPC1-206ENST00000619300 PLEKHM1Q9Y4G2 1056 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 GNG14A0A1W2PPG7 69 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 PRR19A6NJB7 356 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 GABRR3A8MPY1 467 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 TXNDC9O14530 226 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 SCAMP2O15127 329 aaKnown RBP18.32■□□□□ 0.52
PSPC1-206ENST00000619300 PCDH7O60245 1069 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 TPST1O60507 370 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 LAMP1P11279 417 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 POLE2P56282 527 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 PHEXP78562 749 aa18.32■□□□□ 0.52
PSPC1-206ENST00000619300 MAP7Q14244 749 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms