RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 FRMD8P1Q9BZ68 369 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 ASPSCR1Q9BZE9 553 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 TRIM9Q9C026 710 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 LHPPQ9H008 270 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 NUAK2Q9H093 628 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 OPN3Q9H1Y3 402 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 BLZF1Q9H2G9 400 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 MIXL1Q9H2W2 232 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 KLHL31Q9H511 634 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ANKRD19PQ9H560 264 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 KAT8Q9H7Z6 458 aaKnown RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 ZNF334Q9HCZ1 680 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 NIT2Q9NQR4 276 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PRMT8Q9NR22 394 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 FAM86C1Q9NVL1 165 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 TMOD3Q9NYL9 352 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 NDUFAF4Q9P032 175 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SLC17A7Q9P2U7 560 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SPASTQ9UBP0 616 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SLC23A1Q9UHI7 598 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 CPA4Q9UI42 421 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PHF11Q9UIL8 331 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ZNRF3Q9ULT6 936 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 HSPB11Q9Y547 144 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PEX16Q9Y5Y5 336 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 IRAK3Q9Y616 596 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 DGKBQ9Y6T7 804 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 TOGARAM1Q9Y4F4 1720 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ADGRF5Q8IZF2 1346 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 LAMB2P55268 1798 aa3.4□□□□□ -1.86
SMC5-204ENST00000618375 ARFGEF2Q9Y6D5 1785 aa3.4□□□□□ -1.86
SMC5-204ENST00000618375 DICER1Q9UPY3 1922 aaKnown RBP3.4□□□□□ -1.86
SMC5-204ENST00000618375 TRBV23OR9-2A0A075B6M9 112 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 TEX13CA0A0J9YWL9 993 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 A0A1B0GW55 424 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 A0A1W2PPC1 479 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 CIB4A0PJX0 185 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 BCLAF3A2AJT9 711 aaKnown RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 RGSL1A5PLK6 1076 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 FAM86C2PA6NEL3 165 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 NCF1BA6NI72 391 aaPredicted RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 WTIPA6NIX2 430 aaPredicted RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 SLC22A31A6NKX4 558 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 CLDN24A6NM45 220 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 NCF1CA8MVU1 366 aaPredicted RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 ZNF99A8MXY4 864 aaPredicted RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 TRIM49D1C9J1S8 452 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 E5RJQ4 531 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 H3BQ06 376 aaPredicted RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 TMEM189-UBE2V1I3L0A0 370 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 K7ERQ8 282 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 SLC28A1O00337 649 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 CD3EAPO15446 510 aaKnown RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 PSMD3O43242 534 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 GPAA1O43292 621 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 PROM1O43490 865 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 TSPAN6O43657 245 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 PRPSAP2O60256 369 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 PCDHGA12O60330 932 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 LPXNO60711 386 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 HCN1O60741 890 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 NBNO60934 754 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 MITFO75030 526 aaPredicted RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 GLRA3O75311 464 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 ENTPD3O75355 529 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 CRCPO75575 148 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 GPX5O75715 221 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 RPP14O95059 124 aaKnown RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 ANGPTL1O95841 491 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 GCP02774 474 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 APRTP07741 180 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 FGF2P09038 288 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 DUX4L2P0CJ85 424 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 DUX4L3P0CJ86 424 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 DUX4L4P0CJ87 422 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 DUX4L5P0CJ88 424 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 DUX4L6P0CJ89 424 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 DUX4L7P0CJ90 424 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 CBSLP0DN79 551 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 SLC2A1P11166 492 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 ADRB3P13945 408 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 CHRNB2P17787 502 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 BGNP21810 368 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 PAICSP22234 425 aaKnown RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 KCNA5P22460 613 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 CPN2P22792 545 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 CRHBPP24387 322 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 ATP5F1P24539 256 aaPredicted RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 SDHAP31040 664 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 CCR7P32248 378 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 IL13P35225 146 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 RFC2P35250 354 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 CBSP35520 551 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 ARL4AP40617 200 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 RGS6P49758 472 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 DIO1P49895 249 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 RBP2P50120 134 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 GNG10P50151 68 aa3.4□□□□□ -1.87
SMC5-204ENST00000618375 ANXA11P50995 505 aaKnown RBP3.4□□□□□ -1.87
SMC5-204ENST00000618375 PRELPP51888 382 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms