RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 PLIN3O60664 434 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 STK16O75716 305 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 MYL2P10916 166 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 EIF2S3P41091 472 aaKnown RBP16.44■□□□□ 0.22
SBDS-205ENST00000617799 SLC6A12P48065 614 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 CCR8P51685 355 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 CLN3Q13286 438 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 TGIF1Q15583 401 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 PFKFB4Q16877 469 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 TCTE1Q5JU00 501 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 PRAMEF17Q5VTA0 474 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 FRMPD2BQ6IN97 320 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 TLDC1Q6P9B6 456 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 LRRC70Q7Z2Q7 622 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 TMPRSS11BQ86T26 416 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 PLD3Q8IV08 490 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 CACNA2D3Q8IZS8 1091 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 TBC1D19Q8N5T2 526 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 ZNF655Q8N720 491 aaPredicted RBP16.44■□□□□ 0.22
SBDS-205ENST00000617799 TTC29Q8NA56 475 aaPredicted RBP16.44■□□□□ 0.22
SBDS-205ENST00000617799 NEIL2Q969S2 332 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 ESAMQ96AP7 390 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 NDC1Q9BTX1 674 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 ZNF446Q9NWS9 450 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 NKIRAS1Q9NYS0 192 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 GPRC5BQ9NZH0 403 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 TMEM216Q9P0N5 145 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 PTBP2Q9UKA9 531 aaKnown RBP16.44■□□□□ 0.22
SBDS-205ENST00000617799 STK38LQ9Y2H1 464 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 PCDHB3Q9Y5E6 796 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 AP1M2Q9Y6Q5 423 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 IGF2RP11717 2491 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 SDK2Q58EX2 2172 aa16.44■□□□□ 0.22
SBDS-205ENST00000617799 FOXO6A8MYZ6 492 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 TK2O00142 265 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 TAF4O00268 1085 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 H2AFYO75367 372 aaKnown RBP16.43■□□□□ 0.22
SBDS-205ENST00000617799 KATNA1O75449 491 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 SASH3O75995 380 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 DLGAP3O95886 979 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 PROCP04070 461 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 CTSBP07858 339 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 CCNYL3P0C7X3 344 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 GNAZP19086 355 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 MAGOHP61326 146 aaKnown RBP16.43■□□□□ 0.22
SBDS-205ENST00000617799 RPS15AP62244 130 aaKnown RBP16.43■□□□□ 0.22
SBDS-205ENST00000617799 CSNK1G2P78368 415 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 MEF2AQ02078 507 aaPredicted RBP16.43■□□□□ 0.22
SBDS-205ENST00000617799 CDC16Q13042 620 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 SETDB1Q15047 1291 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 PDK4Q16654 411 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 MANEAQ5SRI9 462 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 BROXQ5VW32 411 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 ESX1Q8N693 406 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 CCDC63Q8NA47 563 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 MAGEB10Q96LZ2 347 aaPredicted RBP16.43■□□□□ 0.22
SBDS-205ENST00000617799 DPH1Q9BZG8 443 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 CD244Q9BZW8 370 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 STARD5Q9NSY2 213 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 TXLNGQ9NUQ3 528 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 OPTCQ9UBM4 332 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 ANGPTL3Q9Y5C1 460 aa16.43■□□□□ 0.22
SBDS-205ENST00000617799 LOC105369274A0A096LPK9 316 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 LOC102723532A0A0G2JNH3 316 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 FEZF1A0PJY2 475 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 H0YGG7 62 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 CLGNO14967 610 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 SRPX2O60687 465 aaPredicted RBP16.42■□□□□ 0.22
SBDS-205ENST00000617799 SNUPNO95149 360 aaKnown RBP16.42■□□□□ 0.22
SBDS-205ENST00000617799 HBQ1P09105 142 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 MTHFD2P13995 350 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 CPA3P15088 417 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 AGTR2P50052 363 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 DNAJB13P59910 316 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 ARF3P61204 181 aaPredicted RBP16.42■□□□□ 0.22
SBDS-205ENST00000617799 COL9A2Q14055 689 aaPredicted RBP16.42■□□□□ 0.22
SBDS-205ENST00000617799 GRM7Q14831 915 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 PCBP2Q15366 365 aaKnown RBP eCLIP16.42■□□□□ 0.22
SBDS-205ENST00000617799 WASHC2DQ5SRD0 308 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 CATSPEREQ5SY80 951 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 FBXO42Q6P3S6 717 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 ZYG11AQ6WRX3 759 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 TIPARPQ7Z3E1 657 aaKnown RBP16.42■□□□□ 0.22
SBDS-205ENST00000617799 VASH2Q86V25 355 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 SPACA3Q8IXA5 215 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 OR4N4Q8N0Y3 316 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 ARFGAP2Q8N6H7 521 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 CSNK1A1LQ8N752 337 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 TCP10LQ8TDR4 215 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 MR1Q95460 341 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 NKD1Q969G9 470 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 KIAA1143Q96AT1 154 aaPredicted RBP16.42■□□□□ 0.22
SBDS-205ENST00000617799 C1QTNF3Q9BXJ4 246 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 KCNK9Q9NPC2 374 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 NDOR1Q9UHB4 597 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 SRPK3Q9UPE1 567 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 ASPMQ8IZT6 3477 aa16.42■□□□□ 0.22
SBDS-205ENST00000617799 K7EPI3 171 aa16.41■□□□□ 0.22
SBDS-205ENST00000617799 BIRC5O15392 142 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms