RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 OR2B3O76000 313 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 PPARGP37231 505 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 CA7P43166 264 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 KIR3DL1P43629 444 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 PCM1Q15154 2024 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 TEDDM1Q5T9Z0 273 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 CES3Q6UWW8 571 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 TRIM42Q8IWZ5 723 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 BEND7Q8N7W2 519 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 OR6P1Q8NGX9 317 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 PROKR1Q8TCW9 393 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 SREK1Q8WXA9 508 aaKnown RBP16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 APOPT1Q96IL0 206 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 TTC1Q99614 292 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 RBBP8Q99708 897 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 NRTNQ99748 197 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 C19orf43Q9BQ61 176 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 ZCCHC2Q9C0B9 1178 aaKnown RBP16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 LHPPQ9H008 270 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 SPRTNQ9H040 489 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 SRMSQ9H3Y6 488 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 PKP3Q9Y446 797 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 DNMT3AQ9Y6K1 912 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 AP1M2Q9Y6Q5 423 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 MROH6A6NGR9 719 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 CXorf49A8MYA2 514 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 BTN3A3O00478 584 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 BTN3A1O00481 513 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 HCRTR1O43613 425 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 UNC5CO95185 931 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 SLC35G4P0C7Q5 338 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 NEFHP12036 1026 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 MMP11P24347 488 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 ZNF140P52738 457 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 GUCY1A3Q02108 690 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 TLE4Q04727 773 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 KRT33BQ14525 404 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 CDSNQ15517 529 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 NKAIN1Q4KMZ8 207 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 MROH9Q5TGP6 573 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 NEPROQ6NW34 567 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 ISLR2Q6UXK2 745 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 CCDC91Q7Z6B0 441 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 LCA5Q86VQ0 697 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 CEP97Q8IW35 865 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 C4orf33Q8N1A6 199 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 LCN9Q8WX39 176 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 N4BP2L2Q92802 583 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 TSPAN17Q96FV3 270 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 RMDN2Q96LZ7 410 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 MCCC2Q9HCC0 563 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 FAM60AQ9NP50 221 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 TREX1Q9NSU2 369 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 MKS1Q9NXB0 559 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 FAM8A1Q9UBU6 413 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 DCDC2Q9UHG0 476 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 MID2Q9UJV3 735 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 CORO1CQ9ULV4 474 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 COLEC10Q9Y6Z7 277 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 CCDC88CQ9P219 2028 aa16.84■□□□□ 0.29
TRAPPC3-209ENST00000616395 SOCS6O14544 535 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 GLRA3O75311 464 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 KLHL18O94889 574 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 PRAMEF1O95521 474 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 CTSBP07858 339 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 PYGBP11216 843 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 NDUFS1P28331 727 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 TYK2P29597 1187 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 LSP1P33241 339 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 ADORA2A-AS1P86434 159 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 SRSF11Q05519 484 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 SLC18A2Q05940 514 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 Q0VFX4 171 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 MFAP5Q13361 173 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 DEFB110Q30KQ9 67 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 AARS2Q5JTZ9 985 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 GALNT7Q86SF2 657 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 CNTN4Q8IWV2 1026 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 ACVR1CQ8NER5 493 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 CHTF18Q8WVB6 975 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 NACC2Q96BF6 587 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 MTFMTQ96DP5 389 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 VPS39Q96JC1 886 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 DNAJC1Q96KC8 554 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 PAIP2Q9BPZ3 127 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 RHOJQ9H4E5 214 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 FAM96AQ9H5X1 160 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 PLAC1Q9HBJ0 212 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 SMYD2Q9NRG4 433 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 SLC22A11Q9NSA0 550 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 ACSL5Q9ULC5 683 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 GRID1Q9ULK0 1009 aa16.83■□□□□ 0.28
TRAPPC3-209ENST00000616395 NUP210LQ5VU65 1888 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 SEC16AO15027 2179 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 A0A1W2PPM1 405 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 GMNCA6NCL1 334 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 MGAT4DA6NG13 374 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 SPAG7O75391 227 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 C1QAP02745 245 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms