RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DPF2Q92785 391 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 PIGBOS1A0A0B4J2F0 54 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 HCRTR2O43614 444 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 DDCP20711 480 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 SLC5A11Q8WWX8 675 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 KCND1Q9NSA2 647 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 TMX2-CTNND1H3BSU7 103 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 PABPC4LP0CB38 370 aaKnown RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 ZNF28P17035 718 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 RHCEP18577 417 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 OXTRP30559 389 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 SLC10A1Q14973 349 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 RSU1Q15404 277 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 LRIG1Q96JA1 1093 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 ZIM3Q96PE6 472 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 NUDT15Q9NV35 164 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 TMEM184CQ9NVA4 438 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 KLHL13Q9P2N7 655 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 CAMK2AQ9UQM7 478 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 EFCAB9A8MZ26 197 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 SSX4O60224 188 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 ADH1BP00325 375 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 ZNF136P52737 540 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 WNT3AP56704 352 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 DIO2Q92813 273 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 HMGXB3Q12766 1538 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 DISC1C4P0D8 188 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 SGCEO43556 437 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 OXSR1O95747 527 aaPredicted RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 H2BFMP0C1H6 154 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 Q4G0T1 1027 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 PRICKLE2Q7Z3G6 844 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 KCNN1Q92952 543 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 SLC25A44Q96H78 314 aaPredicted RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 RXFP1Q9HBX9 757 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 GTF2IRD1Q9UHL9 959 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 SYN3O14994 580 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 CDC123O75794 336 aaPredicted RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 GABRA2P47869 451 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 POU3F4P49335 361 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 RPP30P78346 268 aaKnown RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 DHDDSQ86SQ9 333 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 NUDT13Q86X67 352 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 SFRP1Q8N474 314 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 PTCHD1Q96NR3 888 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 KAT8Q9H7Z6 458 aaKnown RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 CORO1CQ9ULV4 474 aaPredicted RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 SALL3Q9BXA9 1300 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 CREBL2O60519 120 aaPredicted RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 CDH12P55289 794 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 FGL1Q08830 312 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 PRKD1Q15139 912 aaPredicted RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 TMEM44Q2T9K0 475 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 CRTC2Q53ET0 693 aaPredicted RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 KIAA1161Q6NSJ0 714 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 MOB2Q70IA6 237 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 ARL14Q8N4G2 192 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 FAM118AQ9NWS6 357 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 PCDHGA2Q9Y5H1 932 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 PSAT1Q9Y617 370 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 ZMYM4Q5VZL5 1548 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 SPARCP09486 303 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 FAAP100Q0VG06 881 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 PAMR1Q6UXH9 720 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 MBOAT1Q6ZNC8 495 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 OR9A2Q8NGT5 310 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 EGFL7Q9UHF1 273 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 GNG8Q9UK08 70 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 SH2B3Q9UQQ2 575 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 AHCYL1O43865 530 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 SRPRAP08240 638 aaKnown RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 TIMP2P16035 220 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 HOXB6P17509 224 aaKnown RBP12.31□□□□□ -0.44
TCF4-248ENST00000616053 IGFBP5P24593 272 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 CDK16Q00536 496 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 RHDQ02161 417 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 NKPD1Q17RQ9 610 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 ITPRIPL2Q3MIP1 535 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 CLNKQ7Z7G1 428 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 IQCF1Q8N6M8 205 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 DHRS9Q9BPW9 319 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 VWA7Q9Y334 891 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 RIPK3Q9Y572 518 aa12.31□□□□□ -0.44
TCF4-248ENST00000616053 EEF1E1-BLOC1S5C9J1V9 151 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 EEF1E1O43324 174 aaKnown RBP12.3□□□□□ -0.44
TCF4-248ENST00000616053 HNRNPLP14866 589 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■■■■□ 21.9
TCF4-248ENST00000616053 SIM2Q14190 667 aaPredicted RBP12.3□□□□□ -0.44
TCF4-248ENST00000616053 DPYSL3Q14195 570 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 POTEHQ6S545 545 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 KIAA0907Q7Z7F0 614 aaPredicted RBP12.3□□□□□ -0.44
TCF4-248ENST00000616053 ZFP90Q8TF47 636 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 NXPE3Q969Y0 559 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 LENG1Q96BZ8 264 aaPredicted RBP12.3□□□□□ -0.44
TCF4-248ENST00000616053 HRASLS2Q9NWW9 162 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 DNM1LO00429 736 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 ADAMTS4O75173 837 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 HSPA7P48741 367 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 TGFBR3Q03167 851 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 GTF2H2Q13888 395 aa12.3□□□□□ -0.44
TCF4-248ENST00000616053 FXNQ16595 210 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms