RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PRAMEF4O60810 478 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 CCNDBP1O95273 360 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 FKBP9O95302 570 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 CAPN1P07384 714 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 CHRM5P08912 532 aaPredicted RBP11□□□□□ -0.65
SLIRP-212ENST00000613856 GIMD1P0DJR0 217 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 PEBP1P30086 187 aaKnown RBP11□□□□□ -0.65
SLIRP-212ENST00000613856 HMOX2P30519 316 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 ARL1P40616 181 aaPredicted RBP11□□□□□ -0.65
SLIRP-212ENST00000613856 MAZP56270 477 aaKnown RBP11□□□□□ -0.65
SLIRP-212ENST00000613856 ABATP80404 500 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 IRF8Q02556 426 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 BTKQ06187 659 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 ZNF33BQ06732 778 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 CHIT1Q13231 466 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 KIR2DS3Q14952 304 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 PLCL1Q15111 1095 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 PDCD2Q16342 344 aaPredicted RBP11□□□□□ -0.65
SLIRP-212ENST00000613856 DEFB133Q30KQ1 61 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 C14orf28Q4W4Y0 310 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 XKR7Q5GH72 579 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 C10orf62Q5T681 223 aaPredicted RBP11□□□□□ -0.65
SLIRP-212ENST00000613856 THEMIS2Q5TEJ8 643 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 ARHGAP40Q5TG30 622 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 PRAMEF9Q5VWM5 478 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 ICE2Q659A1 982 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 TMPRSS11BQ86T26 416 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 C17orf64Q86WR6 236 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 SFTPA2Q8IWL1 248 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 ADGRF3Q8IZF5 1079 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 SLC25A45Q8N413 288 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 ARL14Q8N4G2 192 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 ARL10Q8N8L6 244 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 CDYL2Q8N8U2 506 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 DCBLD1Q8N8Z6 715 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 LSM14AQ8ND56 463 aaKnown RBP11□□□□□ -0.65
SLIRP-212ENST00000613856 ABHD11Q8NFV4 315 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 METTL6Q8TCB7 284 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 SAP25Q8TEE9 199 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 FGF11Q92914 225 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 SLC22A18Q96BI1 424 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 C19orf60Q96EN9 201 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 PTCD3Q96EY7 689 aaKnown RBP11□□□□□ -0.65
SLIRP-212ENST00000613856 THOC1Q96FV9 657 aaKnown RBP11□□□□□ -0.65
SLIRP-212ENST00000613856 CDK15Q96Q40 435 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 CCDC28BQ9BUN5 200 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 DUSP23Q9BVJ7 150 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 LDHAL6BQ9BYZ2 381 aaPredicted RBP11□□□□□ -0.65
SLIRP-212ENST00000613856 NUF2Q9BZD4 464 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 NRSN2Q9GZP1 204 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 SRMSQ9H3Y6 488 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 XKR8Q9H6D3 395 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 PFDN4Q9NQP4 134 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 NLGN3Q9NZ94 848 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 TAC3Q9UHF0 121 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 SH2B3Q9UQQ2 575 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 RNF11Q9Y3C5 154 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 PCDHGA1Q9Y5H4 931 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 ENTPD2Q9Y5L3 495 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 TRBV23OR9-2A0A075B6M9 112 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 SERTM1A2A2V5 107 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 H0YIV9 168 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 SDHDO14521 159 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 PIP5K1BO14986 540 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 SKAP2O75563 359 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-212ENST00000613856 KRT6AP02538 564 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 KRT6BP04259 564 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 JUNP05412 331 aaKnown RBP10.99□□□□□ -0.65
SLIRP-212ENST00000613856 C1GALT1C1LP0DN25 315 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 ALPPL2P10696 532 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 CD22P20273 847 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 HRH2P25021 359 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 KRT6CP48668 564 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 IDH3AP50213 366 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 EPHA4P54764 986 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 INSM1Q01101 510 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-212ENST00000613856 PRDX1Q06830 199 aaKnown RBP10.99□□□□□ -0.65
SLIRP-212ENST00000613856 TUBB3Q13509 450 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 LAPTM5Q13571 262 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 TSTA3Q13630 321 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-212ENST00000613856 DOC2AQ14183 400 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 TBC1D25Q3MII6 688 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 XKR6Q5GH73 641 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 PAGE2BQ5JRK9 111 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 NXPE4Q6UWF7 544 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 ZNF438Q7Z4V0 828 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 FAM129CQ86XR2 697 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 LMNTD1Q8N9Z9 388 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 KYQ8NBH2 561 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 OR2A1Q8NGT9 310 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 ACTRT2Q8TDY3 377 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 USP7Q93009 1102 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 NRTNQ99748 197 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 EBF4Q9BQW3 602 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 TRIM4Q9C037 500 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 PITHD1Q9GZP4 211 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-212ENST00000613856 TUBB1Q9H4B7 451 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 CLMPQ9H6B4 373 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 SNX6Q9UNH7 406 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 FIS1Q9Y3D6 152 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms