RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 CDCP2Q5VXM1 449 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 CES4AQ5XG92 561 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 LETMD1Q6P1Q0 360 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 MED27Q6P2C8 311 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 TMIGD1Q6UXZ0 262 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 RGS9BPQ6ZS82 235 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 CUZD1Q86UP6 607 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 DCBLD1Q8N8Z6 715 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 METTL6Q8TCB7 284 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 REPS1Q96D71 796 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 THAP11Q96EK4 314 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 SLC41A2Q96JW4 573 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 SARGQ9BW04 601 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 SHCBP1LQ9BZQ2 653 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 AKAP7Q9P0M2 348 aaPredicted RBP14.1□□□□□ -0.15
CD48-203ENST00000613788 BTRCQ9Y297 605 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 RAP2CQ9Y3L5 183 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 GVINP1Q7Z2Y8 2422 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 PCNX2A6NKB5 2137 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 H0YIV9 168 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 POLR3GO15318 223 aaPredicted RBP14.1□□□□□ -0.15
CD48-203ENST00000613788 OR1F1O43749 312 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 MT-CO3P00414 261 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 HMOX2P30519 316 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 CCKBRP32239 447 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 CSTF2P33240 577 aaKnown RBP eCLIP14.1□□□□□ -0.15
CD48-203ENST00000613788 REEP5Q00765 189 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 MEF2AQ02078 507 aaPredicted RBP14.1□□□□□ -0.15
CD48-203ENST00000613788 RBBP5Q15291 538 aaKnown RBP14.1□□□□□ -0.15
CD48-203ENST00000613788 CPSF6Q16630 551 aaKnown RBP eCLIP14.1□□□□□ -0.15
CD48-203ENST00000613788 TTC19Q6DKK2 380 aaPredicted RBP14.1□□□□□ -0.15
CD48-203ENST00000613788 FBXO42Q6P3S6 717 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 CLYBLQ8N0X4 340 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 D2HGDHQ8N465 521 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 CHCHD4Q8N4Q1 142 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 CDYL2Q8N8U2 506 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 TTLQ8NG68 377 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 DEPDC7Q96QD5 511 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 ZFYVE21Q9BQ24 234 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 SLC29A3Q9BZD2 475 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 STRADBQ9C0K7 418 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 ZNF225Q9UK10 706 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 PILRAQ9UKJ1 303 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 SNX6Q9UNH7 406 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 UNC13CQ8NB66 2214 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 KCNE1BA0A087WTH5 132 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 A0A1B0GTL3 188 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 FEZF1A0PJY2 475 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 HAT1O14929 419 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 PRAMEF10O60809 474 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 LYPLA1O75608 230 aaPredicted RBP14.09□□□□□ -0.15
CD48-203ENST00000613788 KRT6AP02538 564 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 KRT6BP04259 564 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 CAPN1P07384 714 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 UROSP10746 265 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 CD22P20273 847 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 GSTM2P28161 218 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 ARRB2P32121 409 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 KRT6CP48668 564 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 ZRSR2Q15696 482 aaKnown RBP14.09□□□□□ -0.15
CD48-203ENST00000613788 SH2D4BQ5SQS7 431 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 C10orf62Q5T681 223 aaPredicted RBP14.09□□□□□ -0.15
CD48-203ENST00000613788 MTERF4Q7Z6M4 381 aaKnown RBP14.09□□□□□ -0.15
CD48-203ENST00000613788 B3GNT8Q7Z7M8 397 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 LAS2Q8IYD9 372 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 CACTIN-AS1Q8N1I8 211 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 DNAJC22Q8N4W6 341 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 AFAP1L2Q8N4X5 818 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 AGBL5Q8NDL9 886 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 RCBTB1Q8NDN9 531 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 ZNF740Q8NDX6 193 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 N4BP2L2Q92802 583 aaPredicted RBP14.09□□□□□ -0.15
CD48-203ENST00000613788 SEC16BQ96JE7 1060 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 C20orf27Q9GZN8 174 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 CCDC134Q9H6E4 229 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 ZNF395Q9H8N7 513 aaPredicted RBP14.09□□□□□ -0.15
CD48-203ENST00000613788 PRM3Q9NNZ6 103 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 FAM60AQ9NP50 221 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 ADGRE2Q9UHX3 823 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 ZNF490Q9ULM2 529 aaPredicted RBP14.09□□□□□ -0.15
CD48-203ENST00000613788 PLCL2Q9UPR0 1127 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 CLCA2Q9UQC9 943 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 TSC22D4Q9Y3Q8 395 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 TRAF6Q9Y4K3 522 aa14.09□□□□□ -0.15
CD48-203ENST00000613788 A0A0J9YVX5 310 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 ANKDD1BA6NHY2 528 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 AZIN1O14977 448 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 LCMT2O60294 686 aaKnown RBP14.08□□□□□ -0.16
CD48-203ENST00000613788 SRPX2O60687 465 aaPredicted RBP14.08□□□□□ -0.16
CD48-203ENST00000613788 CTSVO60911 334 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 CHEK2O96017 543 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 MSL3P1P0C860 447 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 SERPINB1P30740 379 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 AHRP35869 848 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 SCTRP47872 440 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 RPL14P50914 215 aaKnown RBP14.08□□□□□ -0.16
CD48-203ENST00000613788 OCRLQ01968 901 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 ACY1Q03154 408 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 IFT88Q13099 833 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 ISXQ2M1V0 245 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms