RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 NOBOXO60393 691 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 SNX4O95219 450 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 GP1BBP13224 206 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 GDF5P43026 501 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 XKP51811 444 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 NODALQ96S42 347 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 XRN1Q8IZH2 1706 aaKnown RBP19.61■□□□□ 0.73
CTDP1-208ENST00000613122 CXorf49A8MYA2 514 aaPredicted RBP19.61■□□□□ 0.73
CTDP1-208ENST00000613122 GPR32O75388 356 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 EBLN1P0CF75 366 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 C8orf89P0DMQ9 161 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 OXTRP30559 389 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 ALDH3A2P51648 485 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 EEFSECP57772 596 aaKnown RBP19.61■□□□□ 0.73
CTDP1-208ENST00000613122 GPR153Q6NV75 609 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.61■□□□□ 0.734e-8■■■■□ 19.8
CTDP1-208ENST00000613122 OR51B5Q9H339 312 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 ASTE1Q2TB18 679 aaPredicted RBP19.61■□□□□ 0.73
CTDP1-208ENST00000613122 C5orf22Q49AR2 442 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 ASPNQ9BXN1 380 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 RPL36Q9Y3U8 105 aaKnown RBP19.61■□□□□ 0.73
CTDP1-208ENST00000613122 FAM240BA0A1B0GVZ2 78 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 ZNF623O75123 536 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 KAT7O95251 611 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 ETV3P41162 512 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 RPS6KA3P51812 740 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 GBX2P52951 348 aaPredicted RBP19.61■□□□□ 0.73
CTDP1-208ENST00000613122 SEC61A2Q9H9S3 476 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 KCPQ6ZWJ8 1503 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 A0A0X1KG70 313 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 ZNF865P0CJ78 1059 aaPredicted RBP19.6■□□□□ 0.73
CTDP1-208ENST00000613122 BMPR1AP36894 532 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 SLCO2A1Q92959 643 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 RETREG1Q9H6L5 497 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 MAFFQ9ULX9 164 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 MUSKO15146 869 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 PDE10AQ9Y233 779 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 LCHNA4D1U4 455 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 ZNF879B4DU55 563 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 STK19P49842 368 aaPredicted RBP19.6■□□□□ 0.73
CTDP1-208ENST00000613122 TBX5Q99593 518 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 GSTM3P21266 225 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 CLEC12AQ5QGZ9 265 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 PRPF38BQ5VTL8 546 aaKnown RBP19.6■□□□□ 0.73
CTDP1-208ENST00000613122 MMABQ96EY8 250 aaPredicted RBP19.6■□□□□ 0.73
CTDP1-208ENST00000613122 CST11Q9H112 138 aa19.6■□□□□ 0.73
CTDP1-208ENST00000613122 OR5K4A6NMS3 321 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 BTN3A3O00478 584 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 FHP07954 510 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 ZDHHC24Q6UX98 284 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 TRAM1L1Q8N609 369 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 MARCH7Q9H992 704 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 IL21RQ9HBE5 538 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 LDB2O43679 373 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 TRMUO75648 421 aaKnown RBP19.59■□□□□ 0.73
CTDP1-208ENST00000613122 EPOP01588 193 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 MAP3K8P41279 467 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 OR2L3Q8NG85 312 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 GPR22Q99680 433 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 CD244Q9BZW8 370 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 UBAP1Q9NZ09 502 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 BACE2Q9Y5Z0 518 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 TFECO14948 347 aaPredicted RBP19.59■□□□□ 0.73
CTDP1-208ENST00000613122 PGRP06401 933 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 HNF1BP35680 557 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 HERC3Q15034 1050 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 IQCCQ4KMZ1 466 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 NANOGNBQ7Z5D8 188 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 ZNF676Q8N7Q3 588 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 OR8D2Q9GZM6 311 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 AIREO43918 545 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 DNAJB1P25685 340 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 OLIG2Q13516 323 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 CBFBQ13951 182 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 CRTC2Q53ET0 693 aaPredicted RBP19.59■□□□□ 0.73
CTDP1-208ENST00000613122 DCAF12L1Q5VU92 463 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 PLET1Q6UQ28 207 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 CEACAM20Q6UY09 585 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 PNLDC1Q8NA58 520 aaKnown RBP19.59■□□□□ 0.73
CTDP1-208ENST00000613122 CAPSLQ8WWF8 208 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 EBF4Q9BQW3 602 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 ZNF717Q9BY31 904 aaPredicted RBP19.59■□□□□ 0.73
CTDP1-208ENST00000613122 H1F0P07305 194 aaKnown RBP19.59■□□□□ 0.73
CTDP1-208ENST00000613122 TXNL4AP83876 142 aaKnown RBP19.59■□□□□ 0.73
CTDP1-208ENST00000613122 MXD1Q05195 221 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 SLC35G1Q2M3R5 365 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 KIAA1161Q6NSJ0 714 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 P2RY8Q86VZ1 359 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 KIAA1191Q96A73 305 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 MAGEE1Q9HCI5 957 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 WDR6Q9NNW5 1121 aaKnown RBP19.59■□□□□ 0.73
CTDP1-208ENST00000613122 TAS2R7Q9NYW3 318 aa19.59■□□□□ 0.73
CTDP1-208ENST00000613122 TRBC2A0A5B9 178 aa19.58■□□□□ 0.73
CTDP1-208ENST00000613122 HYKKA2RU49 373 aa19.58■□□□□ 0.73
CTDP1-208ENST00000613122 C2orf78A6NCI8 922 aa19.58■□□□□ 0.73
CTDP1-208ENST00000613122 NOS1APO75052 506 aaPredicted RBP19.58■□□□□ 0.73
CTDP1-208ENST00000613122 RCBTB2O95199 551 aa19.58■□□□□ 0.73
CTDP1-208ENST00000613122 VSX2P58304 361 aaPredicted RBP19.58■□□□□ 0.73
CTDP1-208ENST00000613122 DHRS1Q96LJ7 313 aa19.58■□□□□ 0.73
CTDP1-208ENST00000613122 CGREF1Q99674 301 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms